Gene Acid345_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0055 
Symbol 
ID4069989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp51930 
End bp52826 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content59% 
IMG OID637982055 
Producthypothetical protein 
Protein accessionYP_589134 
Protein GI94967086 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTT TTGTAACGGG TTCTACGGGG TTGATTGGAC GGGCGGTAAG CGCGCGGCTG 
CGGAGTGAGG GTCATACGGT TACGCCGTTG GTGCGCGGAA CACCGAAGGC CCGCGAGGTG
CAATGGTCGC CGGGAAAAAC TCTGGATCCG GCGGTGCTGG CAAGTGCGGA TGCAGTGATT
CATCTCGCGG GCAAGAACGT CGCTACGAGG TGGACTCCAG AGGAGAAGAA AGAACTCTAT
GAGAGCCGTG TGGCGGGAAC GAAGACGATC AGCGATGCGG TGGCGGAGGC GTTTCGCCGG
ACAGGAAAGC CGACGGTGCT GATTTCAGCG TCGGCGATTG GGTATTACGG AAACCGCGGC
GACGAGGTGC TGACCGAAGA GAGCGCGCCG GGCTCGGGAT TTCTGCATGA TATCTGCGTG
GCATGGGAAG GCGCGGCACA ATCGGCGAAA GATGCAGGTG TACGCGTGGT GCATCCGCGG
ATTGGCGTGG TGCTGAGCAA AGATGGCGGA GCGCTGGCGC AGATGTTACC GATCTTCAAA
CTTGGTGCTG GTGGAAGACT TAGCGGTGGA CGGCAGTGGT GGAGCTGGAT TTCGATCCAC
GACATTGTGG GCGCGATGAT GTTTGCACTG AACAACGTGC AGGTGAGCGG ACCGGTGAAT
TTTACGGGGC CGTATCCGGT GACCAATGCT GCGTTCACGA AGGTTTTGGG TATGGTGCTG
CATCGGCCAA CATTGTTTCC CGTGCCGCGG TTTGCGCTGC ACATTGCGAT GGGGAAGGAA
GCGGCGGAAG AGACGGCGCT GGGGTCGTTG CGTGTGTTGC CGAAACGCTT GCTGGATTAC
GGCTACCAAT TTCAACATGC AGATTTGCGC GAAGCGTTGC ACAATGTGGT GAACTGA
 
Protein sequence
MNVFVTGSTG LIGRAVSARL RSEGHTVTPL VRGTPKAREV QWSPGKTLDP AVLASADAVI 
HLAGKNVATR WTPEEKKELY ESRVAGTKTI SDAVAEAFRR TGKPTVLISA SAIGYYGNRG
DEVLTEESAP GSGFLHDICV AWEGAAQSAK DAGVRVVHPR IGVVLSKDGG ALAQMLPIFK
LGAGGRLSGG RQWWSWISIH DIVGAMMFAL NNVQVSGPVN FTGPYPVTNA AFTKVLGMVL
HRPTLFPVPR FALHIAMGKE AAEETALGSL RVLPKRLLDY GYQFQHADLR EALHNVVN