| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0050 |
|---|
| Symbol | |
|---|
| ID | 4069984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 48026 |
|---|
| End bp | 48958 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637982050 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_589129 |
|---|
| Protein GI | 94967081 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGTC GAGAGTTTCT TGGGAGCTTG GTGGCGGCAG TGGCGTGCGC AGCAGCGGGA
GATGCGTTTG CTGAAGAGCG TGCGCGGCAG ATTGCGTTTA CGTTTGACGA TCCGAAAACT
GACAGCGGCC CCGGGCTGAC CTGGCAGCAG GTGAATGACA ACCTGCTCGC CGCGCTGGAT
AAGGCCAACG TGAAGGCGGC TTTGTTCGTG ACCGGGATGC GCGTGGACAG CGAGGATGGG
CGCAAGCTGG TGGCGAAGTG GAACGATGCG GGGCATTTGA TCGGGAGCCA CTCGTATTCG
CACTTGTTCT TCGATTCGAA GAAGGTGACG CTGGCGGGGT TTGAGGCGGA TCTGTTGAAG
AACGAGCCGC TGGTGGAGAG GTACTCGCAG TTTCAGAAGC TGTTTCGGTT TCCGTTTTTT
AAAGAGGGGA ACACGAAAGA GAAGCGCGAC GGGATGCGCG CGTTTTTGAA GGAGCATGGA
TACAGGATTG GGCGGGCGAC CGTGGATGCT TCGGATTGGG CGATTGATGG GCGCATGCGC
AAGCGGTATG AGAAAGATGC GAAGGCCGAC CTGCGGCCGT ATCGCGACTT CTATCTGCAA
CACATCTGGG ACCGCGCGCA GTATTACGAT TCGCTGGCAC AGCGCGTGTT AGGACGGAGT
CCCGCGCACA CGGTATTGCT CCATCATTCG CCGATGAATG CGATGTTCTT GCCGGATTTG
ATTGCTCAAT TCAAGGGCAA GGGATGGGAG CCGGTGGATG CGGCGAAGGC GTTTGCCGAT
CCGGTGTACG ACCGGCAGCC GGACATTTTG CCTTGCGGCG AGAGCTTGAT CTGGGCGCTG
GCGAAAGAGA CGGGGAAGTT CGACGCGGAG CTGCGGTATC CGGGCGAGGA CGACGTGTAC
GAGAACCCAA AGATGGATGC GCTCGGTTTG TGA
|
|---|
| Protein sequence | MRRREFLGSL VAAVACAAAG DAFAEERARQ IAFTFDDPKT DSGPGLTWQQ VNDNLLAALD
KANVKAALFV TGMRVDSEDG RKLVAKWNDA GHLIGSHSYS HLFFDSKKVT LAGFEADLLK
NEPLVERYSQ FQKLFRFPFF KEGNTKEKRD GMRAFLKEHG YRIGRATVDA SDWAIDGRMR
KRYEKDAKAD LRPYRDFYLQ HIWDRAQYYD SLAQRVLGRS PAHTVLLHHS PMNAMFLPDL
IAQFKGKGWE PVDAAKAFAD PVYDRQPDIL PCGESLIWAL AKETGKFDAE LRYPGEDDVY
ENPKMDALGL
|
|---|
| |