| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0047 |
|---|
| Symbol | |
|---|
| ID | 4069981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 43956 |
|---|
| End bp | 46505 |
|---|
| Gene Length | 2550 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637982047 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_589126 |
|---|
| Protein GI | 94967078 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.760315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGTTCC TCGAAAAACT GAATCCCCAG CAGCGCGAGG CGGTGGAAAC CGTCCATGGA
CCGGTGTTGA TTCTCGCAGG CGCGGGGAGC GGCAAGACGC GGGTTATCAC CTACCGGATT
GCCTACCTGA TCGAGAAGGT TGGGGTGTCG CCGGACTCCA TCCTGGCGAT GACGTTTACC
AACAAGGCTG CCGCCGAGAT GCAGGAGCGC GTGGAACACC TGGTAGGTGG GCGGACGCTG
GCCAAGCCGG TGATTTCGAC GTTCCACTCG TTTTGCGTGC GGGTGCTGCG GCGCGATATC
GAGGCACTGC AGATCAACGG AAAGGGCTAC CGGAAAGATT TCGCGATTTA CGACGAGAGC
GACCAGCAGT CGCTGGTGAA GTCGGCGATG AAGCGGCTGG GGATCGACGA TAAGCAGCTC
ACGGTGCGCA ACGTGCTCTC GCGGATTTCG CATGCGAAGA ACCATCTGCT GGATCCGCAG
GAGGTGTACC TGCAATCCGG CGATCCGAAG GTGGAGCGGA TCGCGCAGAT CTACAAGGTG
TACGAATCGG AGCTGGCGAA AGCGAATGCG CTCGACTTCG ACGACCTGCT GCTGATGACC
AACAAGCTGC TGAAGACCTC GACCGAGGTG CGCGAGCGCT ACAACCGGCG GTTCCAGTAC
GTGCTGATTG ATGAGTACCA GGACACCAAC CGTCCGCAGT ACGAGATCAT GCGGGCGCTG
GCGGGAACGC TGCACAACGT GTGCGCGGTG GGCGATGAGG ACCAGTCGAT CTACTCGTGG
CGCGGGGCGG ACATCCGCAA CATTCTCGAG TTCGAGCAGG ATTTCCCCGA GGCCAAGATC
GTAAGGCTTG AGCAGAACTA CCGTTCGACG CAGAACATTC TGGAAGCGGC GTCGGCAGTG
GTGAAGAACA ACCTGAAGCG GAAGGGCAAG AACCTGTGGA CCGAGCGCAT GGGTGGCGCG
AAGGTCGGGT ATTACGAGGC GCCGGACGGC GAGAACGAGT CGCTGTTTGT GGCCGACTAC
ATCAACAAGT ACCTGATGAT CGCGCACGAT GAAGACGATG AGCCGAAGCG CGCGGCGGTG
CTCTATCGCA CCAACTCGCA GTCGCGATTA TTTGAAGAAG CGATGCGGCG CTATGGCATC
AAGTACAACG TGGTCGGGGG CTTCAGCTTC TACGAGCGCG CCGAAATCAA GGACATGATC
AGCTATCTGA AGCTGATCCA GAACCCGAGC GACTCGGTGG CGCTGCTGCG GACGATTAAT
ACGCCGACGC GTGGGATCGG GAAGACGACC GTCGAGCAGA TTGAGCGGAT TGCGCTGGAG
ACCAACCTTC CGTTGTGGGA TGCGTTGGGG CACATCGTGG AACAGCGACT AATGCAGCCA
CGGGCGTGCG CGGCGCTGAA GGGCTTCCGC GAACTTATTC AGGATGCGCG CGCCATGCTC
TACGGGAAGT TCGAAGAGCG ACTGGTGGAG ACGGCACAGG TATCAAAGCC CGAAGAAAGT
GACGCGGCCG AACCGGAGAT TGCAGACGAA GATCTGCAAG ACAACATGGC GTTCGACTTC
GGAGAACTGG AGCCGGACGC GGAGGAGTTT TCGCCGGAGG CCCTGGGCAC GGCGGAAGAA
GCGGCTCCGG AGAAGGTCGA GGGCTTCCGC TCGCCCGGTG AGAACGCGAA CGTTTCCGAG
GTGCTGAAGT TCTTGATCGA TCGCACGGGA TACATCAAGC AGTTGGAGGC GGAAGACACT
CCGGAGTCGC TGGCGCGGAT TGAGAACCTT CGCGAATTGG TGAATGCGGC GATGGACTCG
CGGGATCGCG GAGAAACGAT TGCGGATTTC CTCGACCACG CCGCGCTGGT GGCGGACACC
GACGACATTG AAGCCGGTGC GCAGGTCACG CTAATGACGA TGCACGCGGC GAAGGGGCTG
GAATTTCCGC TGGTGTTCAT CGTCGGCATG GAAGAAGGGC TGTTTCCGAG CTCGCGGACG
CTGATGAACC CGGATGAAGT TGAGGAAGAG CGGCGGCTTT GTTATGTCGG AATGACGCGG
GCGATGCGCA TCCTTGTGTT GAGCCGGGCG CGGTATCGGC GACGGTATGG GACCGACATG
CCGGATGCGA GTACGGCTTC GCGGTTCCTG AGCGAAGTGC CACCGCAGTT GTTTGAAGAC
ATCGGGTCGC CGCAGAAGAA AACGCCGGTG TTCGGCGATG ACTCGTACAG CACGCATTAC
GACTACGAGA ACGAAGATCA GCGTCCGCAA TATGGACGGA CGAAGCAGAA GACGAGCTAT
GGCGGCGGCT CGACATACAA CTCGATCGAC AACATTGCGG AGTTTTTCGC GTCGCGCGGG
AAGAAATTCA ATCGTCCGAG CGTGCCGATG GAAGAGCCGC ATGGGAAGCG CGGGTTCCGT
CCGGGACAGA AGGTGAAACA CCCCAAGTAT GGGGAGGGGA CGGTGTATCA GCGCGAGGGC
GAAGGGGAAG AAGCCAAGAT TACGGTACAA TTTCCAAGGT TCGGCTTGAA AAAACTGGTG
GAGAAGTTCG CGCAGTTGGA AAAGGCGTGA
|
|---|
| Protein sequence | MQFLEKLNPQ QREAVETVHG PVLILAGAGS GKTRVITYRI AYLIEKVGVS PDSILAMTFT
NKAAAEMQER VEHLVGGRTL AKPVISTFHS FCVRVLRRDI EALQINGKGY RKDFAIYDES
DQQSLVKSAM KRLGIDDKQL TVRNVLSRIS HAKNHLLDPQ EVYLQSGDPK VERIAQIYKV
YESELAKANA LDFDDLLLMT NKLLKTSTEV RERYNRRFQY VLIDEYQDTN RPQYEIMRAL
AGTLHNVCAV GDEDQSIYSW RGADIRNILE FEQDFPEAKI VRLEQNYRST QNILEAASAV
VKNNLKRKGK NLWTERMGGA KVGYYEAPDG ENESLFVADY INKYLMIAHD EDDEPKRAAV
LYRTNSQSRL FEEAMRRYGI KYNVVGGFSF YERAEIKDMI SYLKLIQNPS DSVALLRTIN
TPTRGIGKTT VEQIERIALE TNLPLWDALG HIVEQRLMQP RACAALKGFR ELIQDARAML
YGKFEERLVE TAQVSKPEES DAAEPEIADE DLQDNMAFDF GELEPDAEEF SPEALGTAEE
AAPEKVEGFR SPGENANVSE VLKFLIDRTG YIKQLEAEDT PESLARIENL RELVNAAMDS
RDRGETIADF LDHAALVADT DDIEAGAQVT LMTMHAAKGL EFPLVFIVGM EEGLFPSSRT
LMNPDEVEEE RRLCYVGMTR AMRILVLSRA RYRRRYGTDM PDASTASRFL SEVPPQLFED
IGSPQKKTPV FGDDSYSTHY DYENEDQRPQ YGRTKQKTSY GGGSTYNSID NIAEFFASRG
KKFNRPSVPM EEPHGKRGFR PGQKVKHPKY GEGTVYQREG EGEEAKITVQ FPRFGLKKLV
EKFAQLEKA
|
|---|
| |