| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0023 |
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| Symbol | |
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| ID | 4071728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 23738 |
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| End bp | 24697 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637982023 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_589102 |
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| Protein GI | 94967054 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AGGGCGCAGC CTCGGCGAAA GCGGCAGAGA GCAGCGCCCT TTCTGCTTAT
GTGGCGGTGG ATGCGGCGTC GAAGAGGCTC GTCGAGCAGA TCAAGCGCGT AGCGCAGAGC
GCCGCGACCG TGCTGGTGCG CGGCGAGAAC GGCGTTGGCA AAGATCTTGT TGCGTCGCTG
CTGCACTACC TGGGACCTAA TCGCGATGAG CCGATGGTGA AGATCGACTG CGCGAGCCTG
CCGCACGAAC TCATCGAAAG CGAACTCTTC GGTTACGAGA AGGGCGCGTT CACCGGCGCT
ACGCACCAGA AACGCGGGCG CCTGGAACTG GCCGGCAATG GCACGCTGAT CCTCGATGAG
ATCGCGGCGT TGACGATGCC GATGCAGGCG AAGCTGCTGC GCGTGATCGA ACAGAAAGAG
TTCGAGCGCC TCGGTGGCGA GAAGACGATT AAAGTCCATG CGCGCATTCT TGCCCTGACG
AATGTGGACC TGGAACGCGC GGTGGCGCGG CGATCGTTTC GCGAAGATCT TTACTACCGC
CTGAGCGTGA TTCCGCTTGT GGTGCCACCT CTGCGGGAAC GGCGCGACGA CATCCAGCCG
CTGGCGGAAC ACTTCCTTTC ACAACTCGCG CAGGTGCATC GGCGACCGAA GCCAGTGTTT
ACGGCGGGAG CGTTGGAGGC ATTGCTGAGC TTCAGCTATC CCGGCAATGT TCGCCAGCTG
CGCAATATTC TCGAGCGCGT GGTGGTTATG AGCACCGGCC CGGAGATCCA TGAAGATGAT
CTGCCAAGCT TCGTGCGCCA AGCCACCGGG CGTCCGATGA TGACGCTGGA AGAGTTGGAG
CGCAGCTACA TCGCCGAAGT GCTCGACGCG ACGCGCGGAA AGAAGTCGAA GGCCGCGGAG
ATTTTGGGGA TCAGTCGGAA GACGCTGCTG GAGAAGCGGA AGCGGTACGG GCTGGATTGA
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| Protein sequence | MSEQGAASAK AAESSALSAY VAVDAASKRL VEQIKRVAQS AATVLVRGEN GVGKDLVASL
LHYLGPNRDE PMVKIDCASL PHELIESELF GYEKGAFTGA THQKRGRLEL AGNGTLILDE
IAALTMPMQA KLLRVIEQKE FERLGGEKTI KVHARILALT NVDLERAVAR RSFREDLYYR
LSVIPLVVPP LRERRDDIQP LAEHFLSQLA QVHRRPKPVF TAGALEALLS FSYPGNVRQL
RNILERVVVM STGPEIHEDD LPSFVRQATG RPMMTLEELE RSYIAEVLDA TRGKKSKAAE
ILGISRKTLL EKRKRYGLD
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