Gene Acid345_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0004 
Symbol 
ID4070014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3928 
End bp4977 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content57% 
IMG OID637982004 
Productglutamine-fructose-6-phosphate transaminase (isomerizing) 
Protein accessionYP_589083 
Protein GI94967035 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00308372 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.212879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGCG ACAGTTCCGT TATTCGAGGC CGCTATTTAG AGGACATTCT CGATCAGCCG 
CGAGCACTGC GAGCGACGTG GGATGTGCTC AGTGATTCTT CTGCGTTCGA GCGGATTAGA
ACTCTGCTCG GTTCACGAAA GTTCGAGAGA CTGGTACTGA CCGGCATGGG CTCCTCGTAT
TTCGCTTCAC ACCCACTGGC AATCGAGTGC GCGGAACACG GTTGGACGCC GATCTTGCTG
GAAACCTCGG AACTACTTCA TTACTACCCG CACTTGCTCA AACCGTCGAC GCTGGTGATC
GCGGTTTCGC AATCGGGGCG GAGCGCCGAG ACGGTACGTC TGCTCGAAGG AAACGCAGGA
GGGCACGCGG TGGTTGCGGT GACCAATACG CCCGACAGTC CGCTCGCGAC AAAAGCCGAT
GTCGCGGTAC TCACGAAGGC GGGTGAAGAA TTCTCGGTGT CGTGCAAGAC GTATGTTTCA
TCGCTGATGG CTCTTGAAGT CGTAAGCGCT GCGCTATGTG GGAAATCTAC CGATGACCGG
TTGCAGGAAC TTCAGGTAGC TGCGGATGCT GTCGAGCAAT ACCTCAGAGA GTGGGAGAAA
CACGTCGCAG ATTTGTGTGA GGCGCTGCAG CCGATCAAGG ATATTTTTCT CGTCGGCCGG
GGATCATCCC TGGCAGCGGT GTATACAGGT GCGCTAACGA TTAAAGAATC CGACCATTTC
CATGCGGAAG GGATGAGCAG TGCCGCGTTC CGACACGGAC CGTTTGAGAT GCTCAGGCCC
GAGCTGTTCG TCGCCGTGAT CGCAGGCGAG CAACGAACGC GTGCACTAAA CGAACGCATG
GCAGCGGAGA TTCGCGAAGC CGGCGCGCAC GGTGTACTGA TTTCCACCGA TTCAAACGAC
GCTGCCTGCC GAATTCCGAC TGTTCCCGAA TGTGTCCGGC CGATTGTCGA GATCCTGCCG
GCAGAAATGA TGACCATCGC GCTGGCTGCG CTGGCAGGTC GCGAAGCCGG AAAGTTTGAA
CGGGCCACTA AGATTACGGC GGTCGAGTAA
 
Protein sequence
MKSDSSVIRG RYLEDILDQP RALRATWDVL SDSSAFERIR TLLGSRKFER LVLTGMGSSY 
FASHPLAIEC AEHGWTPILL ETSELLHYYP HLLKPSTLVI AVSQSGRSAE TVRLLEGNAG
GHAVVAVTNT PDSPLATKAD VAVLTKAGEE FSVSCKTYVS SLMALEVVSA ALCGKSTDDR
LQELQVAADA VEQYLREWEK HVADLCEALQ PIKDIFLVGR GSSLAAVYTG ALTIKESDHF
HAEGMSSAAF RHGPFEMLRP ELFVAVIAGE QRTRALNERM AAEIREAGAH GVLISTDSND
AACRIPTVPE CVRPIVEILP AEMMTIALAA LAGREAGKFE RATKITAVE