| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0601 |
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| Symbol | ribD |
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| ID | 4056247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 630850 |
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| End bp | 631986 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637981950 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_589028 |
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| Protein GI | 94677040 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG ATGAATTTTA TCTAGCATTA GCATTTAAGC TAGCTAGACG TGGTAAGCTA
ACAACAGCGC CTAATCCAAA TGTTGGCTGT GTGATCATTC GCGACCATCG CGTTGTTGGT
GAAGGTTATC ATGTACGTGC AGGTGAACCT CATGCAGAAA TACATGCATT ACGTATGGCT
GGTGCTATGG CGTATGGTGC AACTGCTTAC ATAACTTTAG AGCCTTGTAA TCACTATGGA
CATACCCCTC CATGTACCGA AGCGTTAATA GCAGCTGGTA TATCAAGAGT CGTAGCTGCT
ATGTTAGATC CTAATCCTAA AGTAAATGGC CGCGGTTTAT ACCGTCTACA ACAGGCTAAC
ATTGAAGTAC GTCATAGTAT TATGTTACAA GATGCTGAGA TGATTAATAA AGGTTTTCTA
AAACGTATGC GTACTGGATT ACCTTGGATT AGAGTAAAGT TAGCAACATC TTTAGATGGT
CGTACAGCAA TGGCATCAGG AGAAAGTTCT TGGATTACAT CAAATCAGGC TCGTCAGGAT
GTTCAACGCT TCCGTGCTGA AAGTGACGCT ATTCTTTCTA CTTCAGCTAC CGTATTAGCT
GATAATCCGA CACTCAATGT ACGTTGGTTA TCTCTTCCTG CTGATATACA ATGTTTATGT
AAAGAAGAAA ACATACGTCA ACCTATTAAA GTTATTATCG ATAGTGCTAA TAGAGTTAAT
CCTTTTCATC GGATAATCAA AAGTAATGGT ACAACATGGT TAGCACGTAT ACAACCAGAT
GATAAAATCT GGCCTAGATG GGTAGAACAA ATACAGTTAC CTGTATTAAG CAGGCAGGAT
ATACTACGTA TTGATCTAAT GGCACTCATG ATATTACTTG GGAAAAGACA TATTAATAGT
GTATGGGTTG AAGCAGGCGC TAATCTAGCT GGATCACTGC TGTTAGCAGG TTTAGTAGAT
GAGCTTATTC TTTATATGTC ACCAAAACTA CTAGGTGATA AGGCACGGCC ATTATGTTTA
CTACCAGGTT TAGAACGTCT CAGCGACGCA TTAAATTGTA AATTACTAAA TATACGTCAA
GTAGGACCAG ATATACGAAT ATGTTTAAAA CTCATATATT CATTATCAGG ATCATAA
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| Protein sequence | MKSDEFYLAL AFKLARRGKL TTAPNPNVGC VIIRDHRVVG EGYHVRAGEP HAEIHALRMA
GAMAYGATAY ITLEPCNHYG HTPPCTEALI AAGISRVVAA MLDPNPKVNG RGLYRLQQAN
IEVRHSIMLQ DAEMINKGFL KRMRTGLPWI RVKLATSLDG RTAMASGESS WITSNQARQD
VQRFRAESDA ILSTSATVLA DNPTLNVRWL SLPADIQCLC KEENIRQPIK VIIDSANRVN
PFHRIIKSNG TTWLARIQPD DKIWPRWVEQ IQLPVLSRQD ILRIDLMALM ILLGKRHINS
VWVEAGANLA GSLLLAGLVD ELILYMSPKL LGDKARPLCL LPGLERLSDA LNCKLLNIRQ
VGPDIRICLK LIYSLSGS
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