Gene BCI_0599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCI_0599 
SymbolsecD 
ID4056360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBaumannia cicadellinicola str. Hc (Homalodisca coagulata) 
KingdomBacteria 
Replicon accessionNC_007984 
Strand
Start bp627805 
End bp629643 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content32% 
IMG OID637981948 
Productprotein-export membrane protein SecD 
Protein accessionYP_589026 
Protein GI94676605 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAACC ACTATCCTTT GTGGAAATAT ATTATATTAG TCCTCACCCT AATATTAGGC 
ATAATATATG CTCTTCCAAA TCTTTATGGA GAAGATGTTG CTATACAAAT AACTGGCACT
CACGGTGTTA CAGTAAGTGA ATCTACTCTC ATTGATATTA TTCATATATT AAAGCAAAAA
AATATTGTTA GTAAATCTAT TTCATTAACT AATGGTACTA TTCTAGCCAG ATTTTCCAAT
TCCAATATGC AATTGTATGC TCATGATACT TTACTAAAAA CACTAGGCCA TAATTATGTA
GTAGCGCTTA ACTTAGCACC AGCGGTACCC TCATGGTTAA CTATGATAGG TGCATTACCT
ATTAAACTAG GTTTAGATTT AAGGGGAGGG GTACATTTTC TTATTGAAAT AGATATGAAT
ACAGTACTCA ATAATATACA TAAACAAGTT ATAGATGTTT TTATCCAAGA ACTACGGAAG
AATAATATTC CTTATACATC AATAAGTAAA ATTAATAATT ATGGAAGTAA AGTTAACTTT
CTTAATAGTT CTATCTGCGA CGAAGCACTA GCTAAACTGA TGTCCATACA CCGAGATATA
GCTCTTATTA AAAAGGGCAA AAAATATAGC ATTGAAATTT ATTTATTAGA TAATAAATTA
CATGCAGCTA GTAACTTAGC TATACAACAG AATATTAATA TTTTACGTAA TCGCATAAAT
AGATTAGGCA TAGCTGAACC ACTAATACAG CGTCAAGGAG TTAATAGTAT TGTGGTCGAG
TTACCTGGAA TTCAAGATAC TGCCCGTGCT AAGGAAATAA TAGGTGCTAC GGCGATGTTA
GAATTTCGTT TAGTCAATGA AGAACAATCA GAAGAACATA GTAAAATTAC CAGTAATTCT
GAAATAAAAT TTACCCGTAA CGGTACGCCA ATCTTATTAT ATAAGCAAGT ACTTCTTACT
GGAGATCATA TTACTAATGC TACTTTTAGT ACTGATGAGT ATAACCAGCC GCAAGTTAAT
ATTACTCTTG ATCATCAAGG TGGAAAAATT ATGTCTAACT TCACAAAAGA TAATATTAAT
AAGTTAATGG CAATACTATT TATTGAATAT AAGAATAGTA GTGATAATAT AAAAGATAAT
AACCTCTTTC TTAAGCAGGA AGAGGTCATA AATGTTGCTA CTATCCAATC ACACATTAGT
AATATGTTTC GTATTACTGG TCTAAATAAT AGACAAGAAG CCCGTAATCT TTCACTACTA
CTACGTGCGG GAGCATTGAT GGCACCTATT AAAATTGTTG AAGAGTGCAC TATTGGCCCG
ACATTAGGTA TGCAAAATAT TAATCAAGGT TTAAAAGCTT GTTTGTGGGG ACTAATAGCT
GCTGTGCTAT TTATGGTAAT AAGATACCAT AAATTCGGGA TAATTGCTAC TATAGCACTA
ATTGCTAATA TGATTCTAAT AATTGGCATG ATGTCGTTAT TGCCAGGTGT TATTCTAACT
ATGCCGGGTA TTGCTGGTAT AGTACTTACA TTAGCAGTTG CGGTAGATGC TAATGTACTT
ATTTATGAAC GTATCAAAGA AGAGCTAAGT AAAGAGCGTA GTATACAGCA AGCTATTTAC
CAAGGGTATC GTCGAGCGTT TTCTAGTATC ATCGATGCAA ATATTACGAC TATAATTACA
GCTATTATTC TATATGAGTT TGGTACTGGC TCTATTAAAG GTTTTGCAAT TACAACCATA
ATTGGCATTG CTACTTCAAT GTTTACAGCG ATACTAGGTA CTCGTGCTAT AGTTAACTTA
CTATATGGTA ATAAGTTAAT AGATAAACTT TCTATTTAG
 
Protein sequence
MLNHYPLWKY IILVLTLILG IIYALPNLYG EDVAIQITGT HGVTVSESTL IDIIHILKQK 
NIVSKSISLT NGTILARFSN SNMQLYAHDT LLKTLGHNYV VALNLAPAVP SWLTMIGALP
IKLGLDLRGG VHFLIEIDMN TVLNNIHKQV IDVFIQELRK NNIPYTSISK INNYGSKVNF
LNSSICDEAL AKLMSIHRDI ALIKKGKKYS IEIYLLDNKL HAASNLAIQQ NINILRNRIN
RLGIAEPLIQ RQGVNSIVVE LPGIQDTARA KEIIGATAML EFRLVNEEQS EEHSKITSNS
EIKFTRNGTP ILLYKQVLLT GDHITNATFS TDEYNQPQVN ITLDHQGGKI MSNFTKDNIN
KLMAILFIEY KNSSDNIKDN NLFLKQEEVI NVATIQSHIS NMFRITGLNN RQEARNLSLL
LRAGALMAPI KIVEECTIGP TLGMQNINQG LKACLWGLIA AVLFMVIRYH KFGIIATIAL
IANMILIIGM MSLLPGVILT MPGIAGIVLT LAVAVDANVL IYERIKEELS KERSIQQAIY
QGYRRAFSSI IDANITTIIT AIILYEFGTG SIKGFAITTI IGIATSMFTA ILGTRAIVNL
LYGNKLIDKL SI