Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0599 |
Symbol | secD |
ID | 4056360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | + |
Start bp | 627805 |
End bp | 629643 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637981948 |
Product | protein-export membrane protein SecD |
Protein accession | YP_589026 |
Protein GI | 94676605 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAACC ACTATCCTTT GTGGAAATAT ATTATATTAG TCCTCACCCT AATATTAGGC ATAATATATG CTCTTCCAAA TCTTTATGGA GAAGATGTTG CTATACAAAT AACTGGCACT CACGGTGTTA CAGTAAGTGA ATCTACTCTC ATTGATATTA TTCATATATT AAAGCAAAAA AATATTGTTA GTAAATCTAT TTCATTAACT AATGGTACTA TTCTAGCCAG ATTTTCCAAT TCCAATATGC AATTGTATGC TCATGATACT TTACTAAAAA CACTAGGCCA TAATTATGTA GTAGCGCTTA ACTTAGCACC AGCGGTACCC TCATGGTTAA CTATGATAGG TGCATTACCT ATTAAACTAG GTTTAGATTT AAGGGGAGGG GTACATTTTC TTATTGAAAT AGATATGAAT ACAGTACTCA ATAATATACA TAAACAAGTT ATAGATGTTT TTATCCAAGA ACTACGGAAG AATAATATTC CTTATACATC AATAAGTAAA ATTAATAATT ATGGAAGTAA AGTTAACTTT CTTAATAGTT CTATCTGCGA CGAAGCACTA GCTAAACTGA TGTCCATACA CCGAGATATA GCTCTTATTA AAAAGGGCAA AAAATATAGC ATTGAAATTT ATTTATTAGA TAATAAATTA CATGCAGCTA GTAACTTAGC TATACAACAG AATATTAATA TTTTACGTAA TCGCATAAAT AGATTAGGCA TAGCTGAACC ACTAATACAG CGTCAAGGAG TTAATAGTAT TGTGGTCGAG TTACCTGGAA TTCAAGATAC TGCCCGTGCT AAGGAAATAA TAGGTGCTAC GGCGATGTTA GAATTTCGTT TAGTCAATGA AGAACAATCA GAAGAACATA GTAAAATTAC CAGTAATTCT GAAATAAAAT TTACCCGTAA CGGTACGCCA ATCTTATTAT ATAAGCAAGT ACTTCTTACT GGAGATCATA TTACTAATGC TACTTTTAGT ACTGATGAGT ATAACCAGCC GCAAGTTAAT ATTACTCTTG ATCATCAAGG TGGAAAAATT ATGTCTAACT TCACAAAAGA TAATATTAAT AAGTTAATGG CAATACTATT TATTGAATAT AAGAATAGTA GTGATAATAT AAAAGATAAT AACCTCTTTC TTAAGCAGGA AGAGGTCATA AATGTTGCTA CTATCCAATC ACACATTAGT AATATGTTTC GTATTACTGG TCTAAATAAT AGACAAGAAG CCCGTAATCT TTCACTACTA CTACGTGCGG GAGCATTGAT GGCACCTATT AAAATTGTTG AAGAGTGCAC TATTGGCCCG ACATTAGGTA TGCAAAATAT TAATCAAGGT TTAAAAGCTT GTTTGTGGGG ACTAATAGCT GCTGTGCTAT TTATGGTAAT AAGATACCAT AAATTCGGGA TAATTGCTAC TATAGCACTA ATTGCTAATA TGATTCTAAT AATTGGCATG ATGTCGTTAT TGCCAGGTGT TATTCTAACT ATGCCGGGTA TTGCTGGTAT AGTACTTACA TTAGCAGTTG CGGTAGATGC TAATGTACTT ATTTATGAAC GTATCAAAGA AGAGCTAAGT AAAGAGCGTA GTATACAGCA AGCTATTTAC CAAGGGTATC GTCGAGCGTT TTCTAGTATC ATCGATGCAA ATATTACGAC TATAATTACA GCTATTATTC TATATGAGTT TGGTACTGGC TCTATTAAAG GTTTTGCAAT TACAACCATA ATTGGCATTG CTACTTCAAT GTTTACAGCG ATACTAGGTA CTCGTGCTAT AGTTAACTTA CTATATGGTA ATAAGTTAAT AGATAAACTT TCTATTTAG
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Protein sequence | MLNHYPLWKY IILVLTLILG IIYALPNLYG EDVAIQITGT HGVTVSESTL IDIIHILKQK NIVSKSISLT NGTILARFSN SNMQLYAHDT LLKTLGHNYV VALNLAPAVP SWLTMIGALP IKLGLDLRGG VHFLIEIDMN TVLNNIHKQV IDVFIQELRK NNIPYTSISK INNYGSKVNF LNSSICDEAL AKLMSIHRDI ALIKKGKKYS IEIYLLDNKL HAASNLAIQQ NINILRNRIN RLGIAEPLIQ RQGVNSIVVE LPGIQDTARA KEIIGATAML EFRLVNEEQS EEHSKITSNS EIKFTRNGTP ILLYKQVLLT GDHITNATFS TDEYNQPQVN ITLDHQGGKI MSNFTKDNIN KLMAILFIEY KNSSDNIKDN NLFLKQEEVI NVATIQSHIS NMFRITGLNN RQEARNLSLL LRAGALMAPI KIVEECTIGP TLGMQNINQG LKACLWGLIA AVLFMVIRYH KFGIIATIAL IANMILIIGM MSLLPGVILT MPGIAGIVLT LAVAVDANVL IYERIKEELS KERSIQQAIY QGYRRAFSSI IDANITTIIT AIILYEFGTG SIKGFAITTI IGIATSMFTA ILGTRAIVNL LYGNKLIDKL SI
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