| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0581 |
|---|
| Symbol | hfq |
|---|
| ID | 4056351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | - |
|---|
| Start bp | 610494 |
|---|
| End bp | 610754 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637981930 |
|---|
| Product | RNA chaperone Hfq |
|---|
| Protein accession | YP_589009 |
|---|
| Protein GI | 94676938 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.615508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGG GGCAATCTTT GCAAGATATA TTCTTAAATG TATTACGTCG AGAACGTATT
CAGGTTTCTA TTTATTTGTT TAATGGCATT AAATTACAAG GCCATATTGA GTCTTTCGAT
CAGTTTGTGA TTGTACTTAA AAATACTATT AGCCAAATGG TTTATAAACA CGCTGTATCC
ACTATTGTAC CATCAAAATT TGTATCACAC TATGCTAATA ATAGTAGTAA CTATAGCAAT
CATAGTGGTG ATCGTAATTA G
|
|---|
| Protein sequence | MAQGQSLQDI FLNVLRRERI QVSIYLFNGI KLQGHIESFD QFVIVLKNTI SQMVYKHAVS
TIVPSKFVSH YANNSSNYSN HSGDRN
|
|---|
| |