| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0560 |
|---|
| Symbol | carB |
|---|
| ID | 4056610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 590025 |
|---|
| End bp | 593264 |
|---|
| Gene Length | 3240 bp |
|---|
| Protein Length | 1079 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637981910 |
|---|
| Product | carbamoyl-phosphate synthase, large subunit |
|---|
| Protein accession | YP_588989 |
|---|
| Protein GI | 94676523 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
|---|
| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAC GTACCGATAT AAAAAGCATC CTAATTATAG GATCAGGCCC AATCGTGATT
GGGCAAGCTT GTGAGTTCGA TTACTCTGGT GTACAAGCTT GTAAAGCACT ACGCGAAGAG
AACTACCGAG TAGTTCTAGT AAACTCTAAT CCAGCAACTA TTATGACTGA TCCAGATATG
GCTAATGCTA CTTATATTGA GCCTATTCAT TGGAAAGTCG TACATAAAAT CATTGCAAAA
GAGCGCCCAG ATGCAATGCT ACCTACTATG GGTGGTCAGA CTGCACTAAA TTGCGCACTT
GACCTAAATC GTAAAGGTAT ACTAAAAGAT TTTGGAGTAG AGATGATAGG TGCTACCGCC
CATGCTATTG AGCAAGCGGA AAACCGTCAA CTATTTAATC AGGCTATGAA AAAAATAGGA
TTAGATATTC CACGTTCAGG TTTGGCTAGT AATATGAGAG AAGCAAAAGA TGTTGTTGCT
AATGTTGGAT TTCCTTGTAT TATTCGCTCC TCATTTACTT TAGGAGGTAC AGGAGGTGGT
ATTGCTTACT CACAAATAGA TTTTCAAGAA ATTTGCGAAC GTGGATTCGA TCTATTTCAT
CATGGTCAAC TTCTCATAGA AGAATCGCTA ATAGGTTGGA AAGAATATGA AATGGAGGTT
GTGCGTGATA ATAAAGATAA TTGTATTATA GTTTGTGCAC TAGAAAACGT AGATCCTATG
GGTATTCATA CTGGTGACTC TATTACTGTT GCGCCAGCAC AGACACTAAC AGACAAAGAA
TATCAAATTA TGCGGAATGC TTCTATAGCC GTTTTGCGTG AAATAGGTGT CGATACTGGA
GGTTCTAATG TACAGTTTGC GGTAAACCCA ACTACTGGAC AACTCATTAT TATAGAAATG
AATCCACGCG TATCTAGATC ATCTGCTTTA GCTTCTAAAG CAACTGGATT TCCTATTGCG
AGGATAGCCG CAAAACTAGC AGTAGGCTAT CATCTTGATG AATTAATGAA CGGCATTACT
GGTAGCCTAA CACCAGCTTC ATTTGAACCA TCTATCGACT ATGTAGTCAC GAAAATACCA
AGATTTAACT TTGATAAATT CTCTGAGACT AATAATCGTC TAACGACACA GATGAAATCA
GTAGGTGAAG TCATAGCTAT AGGACGTACA CAACAGGAAT CACTACAAAA AGCATTACGT
AGCTTAGAAG TTAACGTAAA AGGATTTGAT CCTAAAGTTA ATCTACAAGA TCCTGCTGCA
TTAACGATAA TTAATTATGA GCTGAAGAAC GCTGGTAGTG AACGTATTTG GTTTATTGCA
GATGCATTTC GTGCTGGAAT GTCAGTGGAT AATGTTTTTC ATTTAACCAA TATTGATCGT
TGGTTTCTCG CCCAAATTGA AGAACTTATA CAAATAGAAA ATAAGGTAGC AAAACATGGC
ATGATTGGTT TAACAGCAGA GTTTCTTCGT CAATTAAAAC GTAAAGGATT TGCTGATGCA
CGTTTAGCGA CGTTAGTTAG CGTTAAGGAA GAAGATATTC GTAAATTACG AGAACATTAT
AACTTATATC CAGTTTATAA GCGAGTAGAT ACCTGTGCTG CGGAGTTCTC AACTCAAACT
GCATATATGT ATTCTACTTA TGATGATGAG TGTGAATCCT TTCCTTGTCA TGATCGCAAA
AAAATTATTG TTTTAGGTGG AGGACCAAAC CGTATTGGCC AAGGCCCGGA ATTTGACTAT
TGTTGTGTAC ATGCTCTGTT AGCATTACGT GAAGAAGGTT ATGAAGCTAT TATGATTAAC
TGTAATCCAG AGACAGTTTC TACCGATTAT GATATGTCAG AGCGACTCTA TCTAGAACCT
GTAACAATAG AAAATGTTTT AGATATAGTA CGTATCGAAC AACCTGATGG TGTTATTATC
CAGTATGGTG GACAAACACC ACTAAAATTA GCATTAGCAC TAGAAGCAGC TGGAGTACCA
ATTATAGGAA CAAAACCTGA TGCAATTGAT AGGGCTGAAA ATAGAGAAAG ATTCCAGAAT
CTAATTAATT ACCTTGGTTT AAAACAGCCT CCCAATGCTA CTGTTACTAG TATAGAGATG
GCGGTAGAAA AGGTAGCTAC TATTGGTGGT TATCCACTTA TGGTACGTCC ATCTTATGTT
CTTGGCGGTC AGGCAATGAA TATTATTTAT AATGAAATGG ATTTAATGAT ATCTTTTCAA
AAAGCATTTA GTATTTCTGT TCATAAAACA CCAGTACTAA TAGAGAAATT TATTGATGAT
GCAATAGAAG TTGATGTAGA TGCTATCTGT GACGGAAAAA CAGTTTTAAT TGGCGGTATT
ATGGAACATA TCGAGCAAGC TGGGATACAT TCTGGTGATT CAGCTTGTTC GCTACCAACT
TATACCATGA ACCATAATAT TAAAGAGGAG ATACGTAGGC AGGTTAAAAA AATTGCTTTA
GAGCTCCAAG TAATAGGTTT AATTAATGTG CAGTTTGCAA TCAAAAAAAA TGATGTTTAC
TTGATTGAGG TTAACCCACG TGCTGCACGT ACTGTTCCTT TTGTCTCTAA AGCTATAGGA
GTAGCTCTTG CTAAAGTTGC TACTAAAGTA ATGATTGGAA AATCACTTAT TGAGCTAGGA
ATAATAAATG AAGTTATTCC ACCTTATTTT TCAGTAAAAA AAGTAGTACT TCCATTCCAT
AAATTTGCTG GTGTTGATCC TATTCTCGGA CCAGAAATGC GTTCTACTGG GGAAGTAATG
GGAGTAGGTA GTACTTTCGC TGAAGCATTT GCAAAAGCAA TGCTTGCTAG CCAATCCTAT
ATAAAAAAAA GTGGGCGAGT TCTACTATCG ATAGGTGACC AACATCCACA CCGAATTGTT
AATCTCGCAA ATAAATTACT TCAGCATGGT TTTGAGTTAG ATGCTACAGA TAGTACCGCA
GTTATACTCC GGAAATATGG TATTAATGTT CGTATAATTC AAACATTCGA TTACATCAGC
CTAAATCAAC AAGTTCAAGA TGGTATAAAA AATGGTAGAT ATAGTTATAT AGTAACTACA
AGTCAACATA TTAAAGTGTT TAAGCAAATT TGTTGTAGTG CTATACAACA TAAAGTGCAT
TACGACACTA CTATGAATAG CGCTTTTGCT ACAGCAATAT CTCTTAATGC TGATGCTACA
GCTCAAGTGA GTTCAATACA AGATATGCAC TTAAAAATAA TGTCTAATAA AAATAAATAA
|
|---|
| Protein sequence | MPKRTDIKSI LIIGSGPIVI GQACEFDYSG VQACKALREE NYRVVLVNSN PATIMTDPDM
ANATYIEPIH WKVVHKIIAK ERPDAMLPTM GGQTALNCAL DLNRKGILKD FGVEMIGATA
HAIEQAENRQ LFNQAMKKIG LDIPRSGLAS NMREAKDVVA NVGFPCIIRS SFTLGGTGGG
IAYSQIDFQE ICERGFDLFH HGQLLIEESL IGWKEYEMEV VRDNKDNCII VCALENVDPM
GIHTGDSITV APAQTLTDKE YQIMRNASIA VLREIGVDTG GSNVQFAVNP TTGQLIIIEM
NPRVSRSSAL ASKATGFPIA RIAAKLAVGY HLDELMNGIT GSLTPASFEP SIDYVVTKIP
RFNFDKFSET NNRLTTQMKS VGEVIAIGRT QQESLQKALR SLEVNVKGFD PKVNLQDPAA
LTIINYELKN AGSERIWFIA DAFRAGMSVD NVFHLTNIDR WFLAQIEELI QIENKVAKHG
MIGLTAEFLR QLKRKGFADA RLATLVSVKE EDIRKLREHY NLYPVYKRVD TCAAEFSTQT
AYMYSTYDDE CESFPCHDRK KIIVLGGGPN RIGQGPEFDY CCVHALLALR EEGYEAIMIN
CNPETVSTDY DMSERLYLEP VTIENVLDIV RIEQPDGVII QYGGQTPLKL ALALEAAGVP
IIGTKPDAID RAENRERFQN LINYLGLKQP PNATVTSIEM AVEKVATIGG YPLMVRPSYV
LGGQAMNIIY NEMDLMISFQ KAFSISVHKT PVLIEKFIDD AIEVDVDAIC DGKTVLIGGI
MEHIEQAGIH SGDSACSLPT YTMNHNIKEE IRRQVKKIAL ELQVIGLINV QFAIKKNDVY
LIEVNPRAAR TVPFVSKAIG VALAKVATKV MIGKSLIELG IINEVIPPYF SVKKVVLPFH
KFAGVDPILG PEMRSTGEVM GVGSTFAEAF AKAMLASQSY IKKSGRVLLS IGDQHPHRIV
NLANKLLQHG FELDATDSTA VILRKYGINV RIIQTFDYIS LNQQVQDGIK NGRYSYIVTT
SQHIKVFKQI CCSAIQHKVH YDTTMNSAFA TAISLNADAT AQVSSIQDMH LKIMSNKNK
|
|---|
| |