| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0503 |
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| Symbol | rpoC |
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| ID | 4056405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 511418 |
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| End bp | 515644 |
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| Gene Length | 4227 bp |
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| Protein Length | 1408 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637981854 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_588938 |
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| Protein GI | 94676668 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.630998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGATC TATTTAAACT GCTGAAAGCA CAAGCTAAGA CTGAAGAATT TGATGCAATA
AAAATTGCAC TAGCCTCGCC TGATATGATT CGTTCCTGGT CTTTTGGTGA AGTTAAAAAA
CCTGAAACGA TAAATTACCG TACTTTTAAA CCTGAACGTG ATGGTTTATT CTGTGCACGT
ATTTTTGGAC CTGTTAAAGA TTACGAATGT CTATGCGGTA AGTATAAGCG TTTGAAACAT
CGTGGTGTTA TTTGTGAGAA GTGTGGTGTT GAAGTTACCC AGACAAAAGT CCGTCGTGAA
CGAATGGGAC ATATTGAGCT TGCTTCTCCA ACAGCACATA TCTGGTTTTT GAAATCTTTG
CCTTCACGTA TTGGATTATT GCTGGATATG CCTTTACGTG ATATAGAACG TGTGCTGTAT
TTTGAGTCTT ACGTTGTGGT TGAAGGTGGT ATGACTTATT TAGAGCGTAA TCAAATATTA
ACAGAAGAGC AATATTTAGA TGCCCTAGAA GAATTTGGTG ATGAATTTGA TGCAAAAATG
GGCGCGGAGG CAATTCATCA TTTATTGAAG AACATGGACC TTGAGCAAGA ATGCGAACAA
TTAAGAGAAG AGATCGTAGA TGTTTCTTCG GAAACAAAAC GTAAAAAACT AACTAAACGC
ATTAAATTAC TCGAGTCTTT CGTACATTCA GGTAATAAAC CTGAATGGAT GATTTTAAAT
GTACTACCAG TATTACCACC TGATTTACGC CCATTAGTAC CGCTAGATGG TGGACGTTTT
GCTACATCTG ATCTTAATGA CTTATATCGT CGTGTAATAA ATAGAAATAA CCGTCTTAAA
AGATTACTAG ATTTATCAGC ACCAGATATT ATTGTGCGTA ATGAAAAACG TATGCTGCAG
GAAGCTGTAG ATGCATTGCT AGATAATGGA AGACGTGGTC GTGTTATTAC TAGTTCTAAT
AAACGGCCTT TAAAATCTTT AGCAGATATG ATTAAAGGAA AACAAGGTCG TTTTCGGCAA
AATTTACTCG GAAAGCGAGT TGATTACTCT GGACGTTCCG TAATTACAGT AGGTCCATAT
TTACGTTTAC ATCAATGTGG TCTTCCGAAG AAAATGGCAC TTGAGCTATT TAAGCCTTTT
ATTTATGGTA AGCTTGAAAT TTGTGGCCTT GCGACAACTA TTAAAGCTGC AAAAAAAATG
GTAGAACGTG AAGAAGCTGT TGTTTGGGAT GTTCTAGACG AAGTTATTCG CGAGCATCCA
GTAATGCTTA ATAGAGCACC TACCTTACAT CGATTAGGAA TACAAGCATT TGAACCAGTT
CTAGTAGAAG GTAAAGCAAT TCAACTACAC CCATTAGTTT GTGCTGCATA TAATGCTGAT
TTTGATGGTG ATCAAATGGC AGTGCATATT CCGTTGACGC TTGAAGCACA GTTAGAAGCT
CGTGCACTCA TGATGTCTAC TAATAATATT TTATCACCTG CTAATGGCGA GCCTATTATT
GTACCATCAC AAGATGTAGT ACTAGGATTA TACTATATGA CTCGTGATCG TGTTAATAGT
AAAGGTGAAG GTATGATATT AACTGGTCCT AAGGAGGCAG AAAAGATTTA TCATGCTGGA
ATAGCTGAAC TACATGCACG TGTTAAAGTA CGTATTACTG AATACGAAAA GATTGATGAT
AATGAGTTAG TTGAAAAAAA ACAGATCATA GATACCACTA TTGGAAGAGC TATACTATGG
ATGATAGTAC CAAAAGGTTT ACCTTTTGAT TTAGTTAACC AGGTACTGGG AAAAAAATCT
ATTTCTAAAA TGTTAAACAC TTGTTATCGT ATACTAGGTC TCAAACCAAC TGTAATTTTT
GCTGATCAAA TTATGTATAC TGGTTTTGCT TATGCTGCCC GTTCTGGTTC ATCAGTTGGC
ATAGATGATA TGGTCATACC TGCTCATAAA GCAGAAATTA TAGATGATGC TGAGAATGAA
GTAGCTGAAA TTCAGGAACA ATTTCAGTCT GGTTTAGTAA CTGCCGGTGA GCGATATAAC
AAAGTTATTG ATATATGGGC TGCGGCAAAT GAACGTGTAG CAAAAGCTAT GATGGATAAT
CTTTCGACTG AAGTTGTCCT CAACTGTCAT GGGAAAGAAG AATTACAAGT TTCATTTAAT
AATATTTTTA TGATGTCTGA TTCTGGTGCA CGAGGTTCGG CAGCGCAGAT TAGACAGTTA
GCAGGTATGC GTGGACTAAT GGCTAAACCT GATGGTTCAA TTATTGAAAC TCCAATTACT
GCTAACTTCC GTGAAGGTTT AAATGTACTA CAATACTTTA TTTCTACACA TGGTGCTCGT
AAAGGGTTAG CTGATACTGC ACTTAAAACA GCAAATTCAG GTTATCTAAC TCGTAGATTA
GTTGATGTTG CACAAGATCT AGTTGTTACC GAAGAAGATT GCGGAACTTT ATCTGGTATT
GTTATGACTC CAGTCATCGA AGGTGGTGAT GTTAAAGAAT CATTACGTGA AAGAGTACTA
GGTCGTGTCA CAACTGAAAA TATACTACAA CCAGGTAAAA CTGATATTCT TGTAAAACGG
AATACACTAC TTAATGAACA GTGGTGTGAT ATATTAGAAG AACATTCTGT AGATAATATT
AAGGTTCGTT CAGTAGTTAC CTGTGATGCT GATTTTGGGG TATGCGCATA TTGCTATGGA
CGTGATTTAG CACGTGGTCA CTTAGTAAAT AAGGGAGAAG CAATTGGAGT GATTGCTGCA
CAGTCTATTG GTGAACCTGG TACACAATTG ACTATGCGTA CTTTCCATAT TGGTGGTGCA
GCCTTCCGGG CTGCAGCAGA ATCAAGTATT CAAGTCAAAA ATCATGGAAT TCTTTGCCTT
GTTAATGCTA AATTTGTTAT TAATAGTGCT AATAAAATAG TTATCACCTC TCGTAATGCT
GAGTTAAAAA TTAGCGATGA ATTTGGCCGT ACAAAAGAAA GTTATAAGGT ACCATATGGT
GCTATAATGG CTAAAGGTGA TGGAGCTAAT ATTATTAGTG GAGAAACTAT TGCAAACTGG
GATCCTCATA CAATGCCAGT TATTACTGAA GTCAATGGTT TTATTCGATT TACTGATATG
ATTGAAGGCC AGACGATTAT TCGCCAAACT GATGAGCTGA CTGGTTTATC TTCTATCGTC
ATATTAGATA CTGCAGAAAG AACTAGTAGT GGTAAAGATT TACGACCGGC TCTTAAAATT
GTTGATGCTA ATCAACAAGA TATACTTATT CCTGGTACCG ACATGCCAGC ACAATATTTT
TTGCCCGGTA AGACTATAGT ACAGTTAGAG GATGGTACTA AAATTACTAG TGGTGATACT
CTTGCACGTT TACCGCAAGA AACTAGTGGA ACTAAAGATA TTACGGGTGG TTTACCGCGT
GTAGCTGATT TATTTGAAGC AAGAATACCA AAAGAACCAG CTATTTTGGC CGAAGCTAGT
GGTATTATTT CTTTTGGTAA AGATACTAAA GGAAAACGAC GCTTAGTAAT ATCATCATTA
CATAGTAATG ATAGTTATGA AGAAATGATT CCTAAATGGC GTCAACTAAA TGTATTTGAA
GGAGAACGTG TAGAACGTGG TGATGTTATT TCTGATGGAC CAGAATCACC GCATGATATT
CTACGGTTAC GTGGTGTACA TGCAGTTACT CGCTATATCA TTAATGAAGT ACAAGACGTA
TATCGTTTAC AAGGTGTAAG AATTAATGAT AAGCATATTG AAGTTATTGT TCGTCAAATG
CTACGGAAAG CTACTATTAT TAATGCTGGT GGATCTGATT TACTAGAAGG TGAGCAGGTA
GAATACTCAA GGATTAAGAT TATTAATCGC CAGTTAAAAA GCGAAGGAAG ACAAGAAATT
ACCTATGTAC GTGATCTATT AGGAATAACA AAAGCATCAT TAGCAACAGA ATCTTTTATA
TCAGCTGCTT CATTTCAGGA GACTACTCGT GTACTCACTG AAGCTTCTGT AGCAGGAAAA
CGTGATGATT TACGTGGTCT AAAAGAAAAT GTTATTGTTG GACGATTAAT ACCTGCCGGT
ACCGGTTATG CTTATCATCA GGAGCGAGCA CGCTATTCTA AGCATAGGGA AGAAGCATTA
GATATGCAAC AAATAACAGC TGCTGATGAA GCTTCTGCTA ATTTAGCTGA ATTATTAAAT
TCTAGCCTAA CTAATCATAA GCATTAA
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| Protein sequence | MKDLFKLLKA QAKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
PSRIGLLLDM PLRDIERVLY FESYVVVEGG MTYLERNQIL TEEQYLDALE EFGDEFDAKM
GAEAIHHLLK NMDLEQECEQ LREEIVDVSS ETKRKKLTKR IKLLESFVHS GNKPEWMILN
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLSAPDI IVRNEKRMLQ
EAVDALLDNG RRGRVITSSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
LRLHQCGLPK KMALELFKPF IYGKLEICGL ATTIKAAKKM VEREEAVVWD VLDEVIREHP
VMLNRAPTLH RLGIQAFEPV LVEGKAIQLH PLVCAAYNAD FDGDQMAVHI PLTLEAQLEA
RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDRVNS KGEGMILTGP KEAEKIYHAG
IAELHARVKV RITEYEKIDD NELVEKKQII DTTIGRAILW MIVPKGLPFD LVNQVLGKKS
ISKMLNTCYR ILGLKPTVIF ADQIMYTGFA YAARSGSSVG IDDMVIPAHK AEIIDDAENE
VAEIQEQFQS GLVTAGERYN KVIDIWAAAN ERVAKAMMDN LSTEVVLNCH GKEELQVSFN
NIFMMSDSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVVT EEDCGTLSGI VMTPVIEGGD VKESLRERVL
GRVTTENILQ PGKTDILVKR NTLLNEQWCD ILEEHSVDNI KVRSVVTCDA DFGVCAYCYG
RDLARGHLVN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA AFRAAAESSI QVKNHGILCL
VNAKFVINSA NKIVITSRNA ELKISDEFGR TKESYKVPYG AIMAKGDGAN IISGETIANW
DPHTMPVITE VNGFIRFTDM IEGQTIIRQT DELTGLSSIV ILDTAERTSS GKDLRPALKI
VDANQQDILI PGTDMPAQYF LPGKTIVQLE DGTKITSGDT LARLPQETSG TKDITGGLPR
VADLFEARIP KEPAILAEAS GIISFGKDTK GKRRLVISSL HSNDSYEEMI PKWRQLNVFE
GERVERGDVI SDGPESPHDI LRLRGVHAVT RYIINEVQDV YRLQGVRIND KHIEVIVRQM
LRKATIINAG GSDLLEGEQV EYSRIKIINR QLKSEGRQEI TYVRDLLGIT KASLATESFI
SAASFQETTR VLTEASVAGK RDDLRGLKEN VIVGRLIPAG TGYAYHQERA RYSKHREEAL
DMQQITAADE ASANLAELLN SSLTNHKH
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