Gene BCI_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCI_0477 
SymbolmltC 
ID4056605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBaumannia cicadellinicola str. Hc (Homalodisca coagulata) 
KingdomBacteria 
Replicon accessionNC_007984 
Strand
Start bp490684 
End bp491706 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content29% 
IMG OID637981829 
Productmembrane-bound lytic murein transglycosylase C 
Protein accessionYP_588915 
Protein GI94676557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0327755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCAT TCTTAATATC TTGTTATCAT AATAACAATC CTTTAACTAA TCAAGTATCG 
CCAAAAACTG TGACTTGTTC ATGTTCATTA GTCGAAAAAA TATGGGGTAT AAATGAATTA
TTAAAAACCG GGCCAAAAAA CTATATCAAA TATACTGATG AATATCAAAC ACGTAGTCAT
ATTAACTTTG ATACTGGCAC TATTACCATA GAAACAATAG CTAACGAAAA AGATGTCACT
ATTAATTTAC GTAAAGCTAT TATCAACACA TTATTAATGT ATATTAATGA GAATAAACAA
GAAATTAGCA CCAATAATCT AATTCTACAA AAAGAACCAT TTTTATATGG TCAAGTTATA
GATCATTATA ATAAACCTAT TCGTTGGTCA TGGCGTGCTA CTAACTTCGC TAATTATTTA
CTAAAAACAA ATCTAAGGAT GCGTCATTCT ACATTACATG ATATATGGTT TATTACCATA
AATATGGTAC CTCAACATAT AAATAAAAGA GCCAATCACT ATGTTACAAT AGTTAGTAAC
GAAGCACGTA AGTATAAAAT AGATCAATCA TTAATTTTAG CTATTATACA AACAGAATCT
AGCTTTAACC CTTATGCTAT TAGTCATGCC AATGCAGTCG GATTAATGCA AATAATGCAA
AACAGTGCTG GTCGTGATGT TTTTAAAATG AAAGGTAAAT GTGGACAGCC TAGTCGTAAA
TATTTGCTAA ACCCAAAAAA TAATATTAAT ATTGGTACAG CTTATTTAGC TATGTTACAA
AATAACTACT TAAGTGGTAT TATTGATTTA ACATCACGAC GTTATGTCAT GATTGTTGCG
TATAATAGTG GTGTTAGCAG TGCACTAAAA GTATTCTCCA GCAATCCAAA CAAAGCATTA
AATATGATTA ATAATTTAAA ACCAGATGAA GTATATCATA TATTATCTAC ACAGCATCCA
TCAGCAGAAT CACGTAACTA TTTAAATAAA GTTAATGCTT TACAACAAAT TTATGGCAAG
TAA
 
Protein sequence
MLPFLISCYH NNNPLTNQVS PKTVTCSCSL VEKIWGINEL LKTGPKNYIK YTDEYQTRSH 
INFDTGTITI ETIANEKDVT INLRKAIINT LLMYINENKQ EISTNNLILQ KEPFLYGQVI
DHYNKPIRWS WRATNFANYL LKTNLRMRHS TLHDIWFITI NMVPQHINKR ANHYVTIVSN
EARKYKIDQS LILAIIQTES SFNPYAISHA NAVGLMQIMQ NSAGRDVFKM KGKCGQPSRK
YLLNPKNNIN IGTAYLAMLQ NNYLSGIIDL TSRRYVMIVA YNSGVSSALK VFSSNPNKAL
NMINNLKPDE VYHILSTQHP SAESRNYLNK VNALQQIYGK