| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0464 |
|---|
| Symbol | sufC |
|---|
| ID | 4056129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | - |
|---|
| Start bp | 478032 |
|---|
| End bp | 478772 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637981816 |
|---|
| Product | FeS assembly ATPase SufC |
|---|
| Protein accession | YP_588902 |
|---|
| Protein GI | 94677007 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.108299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCGA TTCAAAATTT AAATGTAGAA GTCGAAAACA AATTAATTAT CAATAGACTA
AACTTAGAAA TTAAACCAGG TGAAATACAT GCAATTATGG GTCCTAATGG ATCAGGCAAA
AGTACTTTAT CTACTACTTT AGCAGGTCAT AAGGATTATC ATGTAACAGC AGGAACAATA
CGCTTTAAGG AGCATAATTT ACTTATGCTT AATCCTGAAG AACGAGCAGG AGAAGGATTA
TTTTTAGCTT TTCAATATCC TGTTGAAATT CCTGGTATTA GCAATACTCT ATTTTTACAG
ACAGCTATTA ATTCTATTCG TAAATATCGT AAACTGGAGC CACTAGATAG TTGGGATTTA
ATTGATCTTA TCAATCAGAA AATTAATCGG CTAAATATAT CAGATAAACT GTTGAAAAGA
TCAGTAAATG TAGGATTTTC TGGAGGAGAA AAAAAACGTA ATGAAATTCT ACAAATGGCA
GTATTGGAAC CGGATCTATG TATTTTAGAT GAAATAGATT CAGGACTAGA TATTGATGCA
TTAAAAATAA TAGCTAGATG TATTACATTA TTACGTAATG CTAATCGATC ATTCATAGTT
ATAACTCATT ACCAACGTAT TCTAGATGAT ATACAACCAG AATATGTACA TGTAATGCAT
CATGGTAGTA TTATTAAATC AGGGAACTTT TCTCTGGCTA AACAGCTTGA GGAGCAAGGC
TATGACTGGC TCATTAAATA G
|
|---|
| Protein sequence | MLSIQNLNVE VENKLIINRL NLEIKPGEIH AIMGPNGSGK STLSTTLAGH KDYHVTAGTI
RFKEHNLLML NPEERAGEGL FLAFQYPVEI PGISNTLFLQ TAINSIRKYR KLEPLDSWDL
IDLINQKINR LNISDKLLKR SVNVGFSGGE KKRNEILQMA VLEPDLCILD EIDSGLDIDA
LKIIARCITL LRNANRSFIV ITHYQRILDD IQPEYVHVMH HGSIIKSGNF SLAKQLEEQG
YDWLIK
|
|---|
| |