| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0440 |
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| Symbol | rne |
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| ID | 4056293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 452880 |
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| End bp | 454649 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637981792 |
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| Product | ribonuclease E |
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| Protein accession | YP_588881 |
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| Protein GI | 94676970 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA GAATGTTAAT CAATGCAACT CAACATGAAG AGTTGCGTAT CGCTTTAGTA
GATGGTCAAA AATTATATGA CCTAGATATT GAAAGTTTAG GACATGAACA GAAAAAAGCT
AATATATATA AGGGTATTAT TACTAGAATT GAACAAAGTC TTGAAGCTGC TTTTGTTGAT
CATGGTGCTG AGCGTCATGG TTTCTTACCA TTTAAGGAAA TTTCTCGGGA ATATTTTCCA
CCTAACTCTA CTAATAAGCT AAATATTAAA GACGTACTAC GTGAAGGACA AGAAATTATT
GTACAAATAG ATAAAGAAGA ACGAGGTAAT AAAGGCGCTG CACTTACTAC TTTTATTAGC
TTAGCAGGAA GTTATCTTGT TTTGATGCCG AATAACCCTC GTGCAGGAGG AATTTCGCGT
CGTATTGAAG GAGAATCTAG GAATGAGCTT AAGGAAGCAC TATCGTTACT AGAATTACCA
GAAGGTATGG GTCTAATTAT TCGTACAGCA GGGATAGGTA AGTCAGCTGA AGCATTACAG
TGGGATTTAT CATTTCGTCT TCAGCATTGG CAGGCTATCA AAAAAATAGC GAACAGTCGT
CCAGCACCAT TTTTAATTCA TCAGGAGAGT AATGTTCTTG TACGTGCTTT TCGTGATTAT
CTTCGGCCTG ATATTGGTGA AATTCTCATA GATAACTCTA ACATTTTGGA TTTAGCTAAA
AAACATATTA CCTTGTTAGG ACGACCAGAC TTTACTAGCA AAATTAAGTT CTATAATGGG
GAAACTCCAC TTTTTAGCCA CTACCAGATA GAATCACAGA TTGAGTCTGC TTTTCAGCGT
GAAGTACGTT TACCTTCTGG TGGTTCAATA GTTATTGATA CTACTGAGGC ACTAACGGCA
ATAGATATTA ATTCAGCACG TTCAACACGC GGTAGTGATA TCGAAGAAAC TGCCTTTAAT
ACTAACCTAG AAGCAGTAGA AGAAATAGCT CGTCAATTAC GTTTGCGAGA TCTAGCTGGT
TTAATAGTTA TAGACTTTAT TGATATGACA CCGATACGTC ATCAACGCTT AGTAGAAAAT
TGCTTACGTG ATGCTGTACG TCAAGATAGA GCTCGTATTC AGATAGGACG AATATCCCGT
TTTGGTCTAT TAGAACTTTC TCGCCAACGT CTAAGTTCAT CGTTACGTGA TTCTAGTCAT
CATTTATGCC CACGTTGCGG TGGTACAGGT ACGATTCGTG ATAACGAATC ACTATCACTT
TCTATCTTAC GTGTAATTGA AGAAGAAACC CTAAAAGACA ACACGCATGA AGTACATGCA
ATAGTACCTG TACCCATTGC TTCTTATTTA CTTAATGAAA AACGTGATGC TATTAATGCT
ATTGAAAAGC GCCAAGGTGG AGTGCGTGCA GTTATTGTGC CTAATGATCA AATGCAAACT
CCACATTATA TTGTTCTACG AAGACGTAAG GGTGAAAAAG CCACCACACT CAGTTATTTA
TTACCAAAAC TATACTGTAC AGCTAAAATG AACTTAGCTG AAGATATCCC TAATGAACGA
AAAAGTTCCG ATAAGCCTTA TCTAGCTAAA CAAGATAAGT TACAATTACC ACACCAAAAT
ACTAAGCTCA TTATTGCAAC TATGAGTGAT GTGGTTATTC AAATTATATC TAGTTTACGG
TCTTTAGCTA GTATCGAATT TCTTTTCGAA CCAAAATATA ACGAAATACT ATCTCATCTA
ATAAAAGGCA TATTTTATTT TGCATACTAA
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| Protein sequence | MMKRMLINAT QHEELRIALV DGQKLYDLDI ESLGHEQKKA NIYKGIITRI EQSLEAAFVD
HGAERHGFLP FKEISREYFP PNSTNKLNIK DVLREGQEII VQIDKEERGN KGAALTTFIS
LAGSYLVLMP NNPRAGGISR RIEGESRNEL KEALSLLELP EGMGLIIRTA GIGKSAEALQ
WDLSFRLQHW QAIKKIANSR PAPFLIHQES NVLVRAFRDY LRPDIGEILI DNSNILDLAK
KHITLLGRPD FTSKIKFYNG ETPLFSHYQI ESQIESAFQR EVRLPSGGSI VIDTTEALTA
IDINSARSTR GSDIEETAFN TNLEAVEEIA RQLRLRDLAG LIVIDFIDMT PIRHQRLVEN
CLRDAVRQDR ARIQIGRISR FGLLELSRQR LSSSLRDSSH HLCPRCGGTG TIRDNESLSL
SILRVIEEET LKDNTHEVHA IVPVPIASYL LNEKRDAINA IEKRQGGVRA VIVPNDQMQT
PHYIVLRRRK GEKATTLSYL LPKLYCTAKM NLAEDIPNER KSSDKPYLAK QDKLQLPHQN
TKLIIATMSD VVIQIISSLR SLASIEFLFE PKYNEILSHL IKGIFYFAY
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