| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0439 |
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| Symbol | rluC |
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| ID | 4056497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 451394 |
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| End bp | 452362 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637981791 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_588880 |
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| Protein GI | 94676891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC ATAATTCTCA GATATCTTTT ATTAGTATAT CTATACATGA AGCAGGTCAA
AGAATTGATA ATTTCTTACG TACTAAACTT AAGGGAGTAC CTAAAAGTTT AATTTATCGT
ATTATACGTA AAGGAGAGGT TCGCATTAAT AAGAAAAGAA TTAAACCTCA ATATAAACTA
CAAAGTGGCG ATCAGATACG CCTTCCTCCG GTGTGGAGGA ATAACATTAC TCAGCTATTT
TCTCCCCAAC TAAAAAAAGT AGCAGTTCTG GCTGATACTA TCTTATACGA AGATGATTAT
ATATTAGTCT TAAATAAGCC TGCAGGAACT GCAGTACATG GTGGTTATAA ATTAAGCTTT
GGCGTTATAG AAGGATTACG TGCACTATGG CCATTCGCTA AATTTTTAGA GCTAATACAT
AGATTAGACC GTGATACCTC CGGAGCTTTA CTTGTAGCAA AAAAACGTTC CGCGTTACGT
TTGATGCATG AACAATTACG CATGAAAAAT ATCAACAAAC ATTATCTCGC ACTAGTACGA
GGTCAGTGGG AATCGGATAC TGTTGTAGAG GTACCATTAA TGAAAAAAAT TCAATCTAAT
GGTAAACACA TAGTACAAGT TAGTAGTGAC GGTAAAATGT CAAAGACCTT TTTTAAGATT
GAAGAAAATT TCACAATAGC AACATTAGTT AATGCTAGCC CTATTACTGG CCGTACCCAC
CAAATACGAG TACATAGCCA ATATGCTGGT CATCCAATAG CATTTGACGA TCGTTATGGT
GATAATGAAT TTGATCAGCA ACTTAAAAAG TGTGGTTTAA GTAGATTATT TTTGCATGCA
GTAGCACTTA GCTTTAAACA TCCTATCAGT GGTGAAATAT TACGTATTGA AGCCCCATTA
GACGAATCTT TACTTAATTG TCTACTTTAT CTACGTACTT ACCACAATAT TAGTCATCAC
CTAAATTAG
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| Protein sequence | MKEHNSQISF ISISIHEAGQ RIDNFLRTKL KGVPKSLIYR IIRKGEVRIN KKRIKPQYKL
QSGDQIRLPP VWRNNITQLF SPQLKKVAVL ADTILYEDDY ILVLNKPAGT AVHGGYKLSF
GVIEGLRALW PFAKFLELIH RLDRDTSGAL LVAKKRSALR LMHEQLRMKN INKHYLALVR
GQWESDTVVE VPLMKKIQSN GKHIVQVSSD GKMSKTFFKI EENFTIATLV NASPITGRTH
QIRVHSQYAG HPIAFDDRYG DNEFDQQLKK CGLSRLFLHA VALSFKHPIS GEILRIEAPL
DESLLNCLLY LRTYHNISHH LN
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