| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0432 |
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| Symbol | pabC |
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| ID | 4056232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 446730 |
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| End bp | 447533 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637981784 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | YP_588873 |
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| Protein GI | 94676774 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.217429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCTGGA TAAATGGAAA ACTAATACCG CAATTAAAGA TGCTTAACCG CGCCTGTCAG
TTTGGTGATG GTTTTTTTAC TACTGCTCGA TTGTTAGCAG GACAGATATC TTTTTTAGCA
TTACATCTAG AACGTATGCA GTTAGCTGCT AAACGTTTGT TGTTTACTCA GCTAGATATT
GAAGCAATAC GCAAAAATAT GCTTATAGCA GCTGCTACTG GTGGTGACGG ATTTATTAAA
GTTATCATTA GTAGAGGTAT TAGTAACCGT GGCTATAGCT TTAATAGTTG TAGTGATCCA
GTATGTATTA TTGAGCGTGG AAGTAGACCA AATTATTATG ATATATGGCA TAGAAATGGT
TTACGTCTTA CCATAAATCC AGTACGTCTA TCACGTAATC CTTTACTTGC AGGAATTAAG
CATCTCAACC GGCTAGAACA GGTGTTAATA AAAGCTTATT TAGAACGTGA GGAAGGAGAT
GAAGCAATAG TTCTAGATAC TGACGAAAAT ATAGTAGAAT GTTGTAGTGC TAATATATTC
TGGCGGTATG GTAAAAAAGT TTTTACTCCT GCTCTTAATT ATGCAGGAGT TGCTGGTATT
ATGCGTCAAC AAATATTGGC TTTATTACCT CAATTTGGTT ATTCATGCGA AGAAGTTATT
ACCGGTATAT CTACACTGGA ACAAGCAGAT GAAATCATTA TTACTAATGC TTTACTACCT
ATAGCACCAG TTAACTCTAT CGGTTCATAT AATTATGATA ACCGAACACT ATTTAACTTT
CTTTGTCCTT ATTGTCAATG TTAA
|
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| Protein sequence | MFWINGKLIP QLKMLNRACQ FGDGFFTTAR LLAGQISFLA LHLERMQLAA KRLLFTQLDI
EAIRKNMLIA AATGGDGFIK VIISRGISNR GYSFNSCSDP VCIIERGSRP NYYDIWHRNG
LRLTINPVRL SRNPLLAGIK HLNRLEQVLI KAYLEREEGD EAIVLDTDEN IVECCSANIF
WRYGKKVFTP ALNYAGVAGI MRQQILALLP QFGYSCEEVI TGISTLEQAD EIIITNALLP
IAPVNSIGSY NYDNRTLFNF LCPYCQC
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