| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0426 |
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| Symbol | lolC |
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| ID | 4056313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 441980 |
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| End bp | 443173 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637981778 |
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| Product | lipoprotein releasing system, transmembrane protein LolC |
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| Protein accession | YP_588867 |
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| Protein GI | 124246479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CTTTAGCATT ATATATTGGT CTGCGTTATA TGTGCAGACA AGTATCAAAT
GGACGTTTTA TCTCCTTACT GTCTACAATC GGTATTATAT TAGGTGTTAT GGCATTAGTA
ACTATATTAT CGATTATGAA TGGCTTTGAG CGAGTACTAG AAAATAATGT TCTGCGTTTT
ATTCCTCAAG CGCTGTTAAC AACTAAGAAT GGTTGTTTAA ATCCGTTATC TGCTCCGTTC
TTTMTTAAAG AAGATATACT AAAAGATAAA GGAGTAATAG GCATTGCACC TTTTACTACC
GGAGATGTTA TTTTACAGAG TCCTAATAGT TTTGCTATGG GAATTATACT TGGGATTAAT
TCTAGTGATT CTGAACCTTT AGCCAACTAT TTAGTAGATA CACACATAAG CCAGCTATCT
CCCGGTAAGT ATCATATTAT TCTTGGTCAG AAGTTAGCAG ATAAGCTGGG TGTAAAATAT
AACGATAAAA TACGCATAAT TGTGCCTTCG GTTAGTCAAT TTACTCCTCT TGGTCGTATC
CCTAGTCAAC GTTTATTTAC TGTAATAGGT ACATATATTA CTAATAGTGA AGTTGATCAA
TATCAAATAC TAGTAAATCA GCAAGATGCT TCGCATCTTA TGCATTATCC GTCCGGTTAT
GTTACAGGTT GGCGTCTATG GTTACAGCAA CCTCTAAAAG TAGACAGTAT TAGCAAAATA
CAGTGCTTAC CGAATGAGTT AATCTGGAAA GATTGGCGTG AACGTAAGAG CGAATTATTT
CATGCTATAC ATATGGAAAA AAATATTATG GGTTTACTAC TCAGCTTAAT TGTAGTAGTA
GCCGCATTTA ATATTCTGAC TTCTTTATGC ATGATAGTAA GAGAAAAGAA AAGCGAAGTA
GCTATTTTTG CTACACAGGG ACTACAATTT TACCAAATTA TGCCAGTATT TATGATTCAG
GGAGTTAGTG CAGGGATTAT TGGAGCACTT GTAGGTGCTA TTTTAGGAGT ATTATTAGCA
AATACACTAA ATTATTTTCC ATTATTTCAT AATAATACAT TACCAATTAA TATTGAACCT
TTACAGATAG TAACTATTAT AATACTAACT ACAGTATTAG CATGGCTATC TACTATTTAC
CCTTCTTGGT GTGCCGTAAC AAAAAATGTA GTTGAGTTAC TACGCGATGA ATAA
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| Protein sequence | MYQPLALYIG LRYMCRQVSN GRFISLLSTI GIILGVMALV TILSIMNGFE RVLENNVLRF
IPQALLTTKN GCLNPLSAPF FJKEDILKDK GVIGIAPFTT GDVILQSPNS FAMGIILGIN
SSDSEPLANY LVDTHISQLS PGKYHIILGQ KLADKLGVKY NDKIRIIVPS VSQFTPLGRI
PSQRLFTVIG TYITNSEVDQ YQILVNQQDA SHLMHYPSGY VTGWRLWLQQ PLKVDSISKI
QCLPNELIWK DWRERKSELF HAIHMEKNIM GLLLSLIVVV AAFNILTSLC MIVREKKSEV
AIFATQGLQF YQIMPVFMIQ GVSAGIIGAL VGAILGVLLA NTLNYFPLFH NNTLPINIEP
LQIVTIIILT TVLAWLSTIY PSWCAVTKNV VELLRDE
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