| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0425 |
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| Symbol | lolD |
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| ID | 4056660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 441277 |
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| End bp | 441987 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637981777 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_588866 |
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| Protein GI | 94676572 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATA CACCTTTATT AAAATGTTGC CAACTCAGTA AAAGCTATCA AGAAGGAGAA
TTTTCTTCTT GTGTGTTACT AAATGTGAAT TTAACTATAC ACACAGGAGA TATGATAGCA
ATTATTGGAC CTTCTGGCTC AGGAAAAAGT ACGCTATTGC ATTTACTAGG AGGATTAGAT
ACACCAACAT CTGGTGATAT CCTTTTTGAA GGAAAGTTAC TTAAAACATT ATCCTCAGCA
GCTTGTGCTA AATTACGTAA TCAACGATTA GGTTTTATAT ATCAATTTCA CCACCTATTA
TCAGACTTCA CTGCTTTAGA AAATGTTGCA ATGCCGAGAA TGATAAGAGG AGAAAAAGCA
AAGGTTGCAC AAATAGCTGC ACTTAAAATG TTAACTATGG TAGGTTTAGA AAAACGTAGT
CATCAGAAAC CTTCTGAACT ATCTGGTGGT GAGCGTCAAC GTGTAGCTGT TGCTCGAGCT
CTAGTAAATA ATCCATCTCT TGTTCTGGCC GATGAACCTA CTGGTAATCT AGATAAGCGT
AATGCAAATA TGATTTTTGA ATTAATTAGA TCAATTAACG GCAAACATGG TACTGCTTTC
ATTGTTGTTA CACATGATTT ACGTCTAGCT CAAAGTTTAC CCCGTCAATT TGAAATGCAA
GAAGGAGTAC TTATGCCATA TGGTAGCCCT TTATTGAGCT CCAATCAATG A
|
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| Protein sequence | MNNTPLLKCC QLSKSYQEGE FSSCVLLNVN LTIHTGDMIA IIGPSGSGKS TLLHLLGGLD
TPTSGDILFE GKLLKTLSSA ACAKLRNQRL GFIYQFHHLL SDFTALENVA MPRMIRGEKA
KVAQIAALKM LTMVGLEKRS HQKPSELSGG ERQRVAVARA LVNNPSLVLA DEPTGNLDKR
NANMIFELIR SINGKHGTAF IVVTHDLRLA QSLPRQFEMQ EGVLMPYGSP LLSSNQ
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