Gene BCI_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCI_0422 
SymboltrmU 
ID4056428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBaumannia cicadellinicola str. Hc (Homalodisca coagulata) 
KingdomBacteria 
Replicon accessionNC_007984 
Strand+ 
Start bp437173 
End bp438279 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content34% 
IMG OID637981774 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_588863 
Protein GI94676746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.861581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA TTAATAAAAA AGTTATTGTC GGTATGTCAG GTGGTGTTGA TTCTTCTGTA 
TCTGCTTTGT TATTACTACA ACAAGGTTAT ACAGTAGAAG GTCTATTTAT GAAAAATTGG 
GAAGAAGATG ATCATGAACA ATATTGCACG GTTGCTAAAG ATCTAGCGGA TGCACAAGCT 
GTCTGTAATC AATTAGGTAT TATATTGCAT AAGGTAAACT TTGCAGCAGA GTATTGGGAT 
AATGTATTTG AATATTTTCT AGCAGAATAT CAGGTTGGAC GTACTCCTAA TCCAGATATA 
CTATGTAATA AAAATATTAA GTTTAAAGTT TTCTTAGATT TTGCAACACA AAATCTCGGT 
GCTGATTATA TCGCTACCGG ACATTATGTA ATTCGTAAGG ACATTAATGG AAAAAGTAGG 
TTACTAAGAG GATTAGATAA TCAAAAAGAT CAAAGTTACT TCCTTTATAC CATTGGATAC 
CAACAGATGG CCCGCTGCTT TTTCCCATTA GGCAAACTAA ATAAACTCAG AGTACGAGAA 
ATAGCAGCAA AACAAGGATT AGTAACTGCA TCTAAAAAAG ACTCTACTGG TATTTGTTTT 
ATTGGCAAAC GTAAATTAAG TGATTTACTT AGTCGTTATA TTTCAGCTAA ACCAGGAGCA 
ATTATCACAG TTGATAATGA ATATATCGGC TATCATCAAG GTTTAATGTA TTATACTCTT 
GGTCAACGTA AAAAACTAGG TATTGGTGGT ACTAAAAATG GTAGTCAAGA TCCTTGGTAT 
GTAGTAGATA AAGATATCAA TCATAATTTA TTAATAATTG CCCAAGGACA TAATCATCCA 
CGTCTTATGT CTAATGGTCT CATTGCCTCC AAATTATACT GGGTTGATCG TACTACTTTA 
AGTACACCAC TTCGATGTAC CGTTAAAACA CGCTATCGAC AATCTGATAT AGGTTGTTTA 
ATCAAACCAA TCGCTAATAA TCAGTTACAA GTAGACTTTG ATTATCCAGT AGCAGCAGTA 
ACACCTGGCC AGTCTGCAGT ATTTTATCTA GCAGAACAAT GTATAGGTGG AGGTACTATA 
GAGATAAGAA AACCATTAGG GAGCTAA
 
Protein sequence
MNIINKKVIV GMSGGVDSSV SALLLLQQGY TVEGLFMKNW EEDDHEQYCT VAKDLADAQA 
VCNQLGIILH KVNFAAEYWD NVFEYFLAEY QVGRTPNPDI LCNKNIKFKV FLDFATQNLG 
ADYIATGHYV IRKDINGKSR LLRGLDNQKD QSYFLYTIGY QQMARCFFPL GKLNKLRVRE 
IAAKQGLVTA SKKDSTGICF IGKRKLSDLL SRYISAKPGA IITVDNEYIG YHQGLMYYTL 
GQRKKLGIGG TKNGSQDPWY VVDKDINHNL LIIAQGHNHP RLMSNGLIAS KLYWVDRTTL 
STPLRCTVKT RYRQSDIGCL IKPIANNQLQ VDFDYPVAAV TPGQSAVFYL AEQCIGGGTI 
EIRKPLGS