| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0397 |
|---|
| Symbol | gnd |
|---|
| ID | 4056637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | - |
|---|
| Start bp | 410283 |
|---|
| End bp | 411689 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637981749 |
|---|
| Product | 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| Protein accession | YP_588840 |
|---|
| Protein GI | 94676911 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGAC AACAGATTGG TGTAGTTGGT ATGGCGGTAA TGGGGCGTAA TTTAGCACTT
AATATGGCAA AAAATGGCTT TCGGGTATCG ATTTTTAATC GTTCACGAGA AAAAACTGAA
CATGTCATGG CAGAAAATCC TGGGATTAAT CTTTTTCCTT ATTTTTCACT CAGAGAATTT
ATTAATTCAC TAGAAAAACC ACGTCGTATT TTGTTAATGG TAAAAGCAGG AGAAGCAACA
GATCAAACAA TTAATGCACT AAAATCCTTT ATCGATAAAG GAGATATTCT GATTGACGGT
GGTAATTCTT TTTATCATGA TACTATACGT AGAAACCAAG AGCTATCAAA AGATGGTTTT
TATTTCATAG GCACAGGTAT TTCTGGTGGC GAAGAAGGTG CACTGAAAGG ACCTTCAATT
ATGCCTGGTG GTCAGAAAGA AGCTTATAAT TTTATATCAC CTATTTTCGA AACAATTGCT
GCTCGTGCTA ATGGTGAAGC ATGTGTTGCT TATATTGGTC CTGATGGTTC CGGACACTAT
GTAAAAATGG TTCATAACGG TATTGAATAT GGCGATATGC AACTTATTGC AGAAACTTAT
GCTTTATTAA AAATAATACT TGGTATGAAT AATGATGAAT TAGCAAATAT TTTTTACGAG
TGGAATCAAG GTGAGTTAAG TAGCTATCTT ATGGATATTA CCCATAAGAT CTTTACTCAG
AAAGATATCA CAGGTAAATA TTTGATCGAT GTTATCGCCG ATGAAGCTAC TCATAAAGAG
ACAGGTAAAT GGACTAGCCA AAGTGCACTA GATCTAGGAG AACCACTAAA CTTAATTACT
ACTGCGGTTT TTGCCCGGTA TTTATCATCG TTAAAACAGC AGAGAATTTG TGCTAGTAAA
GTACTCAAAG GCCCAACAAC AAAATACTTC AGTATTGATA AACCAGCATT TATTGAAAAT
ATGCGTCGAG CACTATATTT AGGTAAAATC ATTTCTTATG CTCAAGGTTT TTCGCAGCTC
AAAGCTGCAT CAGCTAAATT TAACTGGAAT CTAAATTATG GCGATATTGC TAAAATATTC
CGTTCTGGAT GTATTATTCG TGCCCAGTTC TTACAGAACA TAACTGATGC TTACACCCAA
AATACTTTTA TTACTAATCT TTTATTATCA CCTTATTTCA AAGCAAAGGC TAATGATTAT
CATCAGGCTT TACGTGAAGT TGTGACTCAT GCTATTCATA ATGGTATTCC AGTACCAACT
TTATCTGCAG CTATTACCTA CTACGATAGT TACCGTTCGC TGATGTTGCC AGCTAATTTA
ATTCAAGCAC AGCGTGATTA CTTTGGAGCA CATACCTATA AGCGTATCGA TAAAGAGGGT
ATTTTCCATA CTGAATGGCT AACGTAA
|
|---|
| Protein sequence | MLRQQIGVVG MAVMGRNLAL NMAKNGFRVS IFNRSREKTE HVMAENPGIN LFPYFSLREF
INSLEKPRRI LLMVKAGEAT DQTINALKSF IDKGDILIDG GNSFYHDTIR RNQELSKDGF
YFIGTGISGG EEGALKGPSI MPGGQKEAYN FISPIFETIA ARANGEACVA YIGPDGSGHY
VKMVHNGIEY GDMQLIAETY ALLKIILGMN NDELANIFYE WNQGELSSYL MDITHKIFTQ
KDITGKYLID VIADEATHKE TGKWTSQSAL DLGEPLNLIT TAVFARYLSS LKQQRICASK
VLKGPTTKYF SIDKPAFIEN MRRALYLGKI ISYAQGFSQL KAASAKFNWN LNYGDIAKIF
RSGCIIRAQF LQNITDAYTQ NTFITNLLLS PYFKAKANDY HQALREVVTH AIHNGIPVPT
LSAAITYYDS YRSLMLPANL IQAQRDYFGA HTYKRIDKEG IFHTEWLT
|
|---|
| |