| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0363 |
|---|
| Symbol | pdxB |
|---|
| ID | 4056566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 369660 |
|---|
| End bp | 370790 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637981715 |
|---|
| Product | erythronate-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_588807 |
|---|
| Protein GI | 94676828 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAC TAGTTGATGA AAATATACCT TACGCTCATA AAATCTTTAG TAGATTGGGT
GATGTGCAAA TTATACATGG ACGTAAAATT ACTGCTCAAA TAGTTTCATC TTATGATGCT
CTAATAGTAC GTTCAGTTAC TAATGTAAAT CAATCTTTAT TAGAAGGCAG TAAAGTACGA
TTTGTAGGTA GTACTACATC TGGTATAGAT CATATTGATG ATCATTGGTT AGAAAAATCA
GGGATTAAAT TCTCCTATGC TGCTGGTTGT AATGCTATAG CAGTAGTAGA ATATGTTTTT
ACAGCGCTGC TATTATTATC ACAACGCTAT GGTTTTCACT TACGTGATAA GACAGTCGGT
ATTATTGGTG TAGGTAATAT TGGTCGTTTA TTATACCAGC GACTTAATGC TTTTGGTGTA
CCTACTTTAT TATGTGATCC CCCACAAGCT GAAATAAGTA CTATAGGTGA ATGGCAATTG
CTAGAAAAAT TAGTTACGGA AGCAGACGTA CTAACATTAC ATACACCACT GACTTACCAT
GGGCGACATG CTACCTGGCA TCTCATAAAT GAAGATTTAT TGTCTGCGTT ACCTTCTACT
AAACGTATAT TAATAAATAC TTGCCGTGGT GCCGTAGTAG ACAATGTAGC ACTGCTACAT
GCTTTAAAGA AAGGTAAGTT ACTTAGTGTC ATTTTAGATG TTTGGGAAAA AGAACCAAAT
TTATCTCTAT CGCTATTAAA TAATGTTGAT ATAGGGACTG CACATATTGC AGGTTATAGT
TTAGAGGGTA AGGTACGTGG AGCTATTAAG ATTTTTAACG ATTATAGCAA ATTTCTCGGA
GCTATTCAAT CCTTAAATGT TTCGGCATTT TTACCAGCAC CCATGATTGA ATATGTTCGT
TGGCACGGAG TTATAAACGA AGAAGAATTA CGTAAGTTAG CATATTTGAT ATACGATTTA
CAATTTGATG ATATCCTTTT ACGCCGCAAT ATCCATAAAC CACATGGATT TGATCAACTA
AGAACTAATT ATTGTGAGCG TCGGGAGTGG TCATCTTTAT CTGTTGGAAC AGATAACAAT
ATAAGTACGA ATATGCTCAA TCAGTTAGGT TTTAAATCAA TTCTAATATA G
|
|---|
| Protein sequence | MKILVDENIP YAHKIFSRLG DVQIIHGRKI TAQIVSSYDA LIVRSVTNVN QSLLEGSKVR
FVGSTTSGID HIDDHWLEKS GIKFSYAAGC NAIAVVEYVF TALLLLSQRY GFHLRDKTVG
IIGVGNIGRL LYQRLNAFGV PTLLCDPPQA EISTIGEWQL LEKLVTEADV LTLHTPLTYH
GRHATWHLIN EDLLSALPST KRILINTCRG AVVDNVALLH ALKKGKLLSV ILDVWEKEPN
LSLSLLNNVD IGTAHIAGYS LEGKVRGAIK IFNDYSKFLG AIQSLNVSAF LPAPMIEYVR
WHGVINEEEL RKLAYLIYDL QFDDILLRRN IHKPHGFDQL RTNYCERREW SSLSVGTDNN
ISTNMLNQLG FKSILI
|
|---|
| |