| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0352 |
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| Symbol | rpsD |
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| ID | 4056619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 362356 |
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| End bp | 362976 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637981704 |
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| Product | ribosomal protein S4 |
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| Protein accession | YP_588800 |
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| Protein GI | 94676532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.931615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATTTAGGGCC TAAACTTAAA ATGAGTCGTC GTGAGAACAT AGATCTTTTT
CTTAAATCTG GTGTTCGTGC TATAGATTCT AAATGTAAAA TTGAGCAACC TCCTGGTCAA
CATGGAGCAC GTAAACCACG TCTCTCTGAT TATGGTTTAC AACTACGTGA AAAACAAAAA
GTACGTCGTA TATACGGTAT ACTAGAACGC CAATTTCGTA ACTATTATCA AGAAGCCGCA
CGTCTGAAAG GTAATACTGG TGAAAGCTTA TTACAGCTAT TAGAAAGTCG CTTAGATAAT
GTTGTGTACC GAATGGGTTT TGGTGCAACC CGTGCAGAAT CTCGCCAATT AGTTAGTCAT
AAAGCTATTA TGGTTAATAA CCATATAGTT AATATAGCAT CCTATCAAGT AGCTATTAAT
GATAAAATTA GCATACGTGA TAAAGCAAAA AAGCAATCTC GCATTCGTGC TTCATTAGAA
CTAGCTGAGC AACGTGAAAA ACCTACCTGG CTTGAGGTGG ATATAGTTAA AATGGAAGGT
ATATTTAAGA AAATACCTGA AAGAATTCAT CTATCAGCAC ATATTAATGA ACATATGATC
GTTGAACTTT ACTCTAAGTA A
|
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| Protein sequence | MARYLGPKLK MSRRENIDLF LKSGVRAIDS KCKIEQPPGQ HGARKPRLSD YGLQLREKQK
VRRIYGILER QFRNYYQEAA RLKGNTGESL LQLLESRLDN VVYRMGFGAT RAESRQLVSH
KAIMVNNHIV NIASYQVAIN DKISIRDKAK KQSRIRASLE LAEQREKPTW LEVDIVKMEG
IFKKIPERIH LSAHINEHMI VELYSK
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