| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0302 |
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| Symbol | topA |
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| ID | 4056153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 322283 |
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| End bp | 324856 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637981654 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_588751 |
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| Protein GI | 94676515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG CTCTTGTAAT AGTAGAATCT CCGGCAAAAG CGAAAACTAT CAATAAATAT
CTAGGTAATC AATATCTAGT TAAATCTAGC ATTGGTCATA TTCGTGATTT ACCTATTCAT
CGTGAAACAG TTAAACAACA AGGTAAAACT AACTATCAAA ATACATTAGC TAACCGTATG
GGTATCGATC CTTACAATAA TTGGTTCGCA AATTATGAAA TCTTACCAGG TAAAGAAAAA
CTAGTTAACG AGTTAAAAGC TCTTGCAAAC AAAGCTAAGC ATATTTATTT AGCAACTGAT
CTTGACCGCG AAGGTGAAGC CATTGCTTGG CATATTAGGG AAGTCATAGG CGGTGATAAT
AGTAAATTTA GCCGAGTAGT ATTTAATGAA ATTACATGTA ATGCTATAAC TCAAGCTTTT
CAAAGTCCTA GAGAGCTAAA TTTGCATCGT ATTAACGCAC AGCAAACACG GCGATTTATG
GATCGTATAG TAGGATATAT GATTTCTCCT TTATTATGGA AAAAAATAGC TCGGGGTTTA
TCTGCTGGTA GGGTGCAATC AGTTGCTGTT AAACTAATTG TAGAACGTGA ACGCGAAATT
AAACAATTTT CACCAATAGA ATATTGGGAC CTATATTCTT ATCTACAAGG TCCTAAAGAT
ATTGTACTAA AAATGCAAGT CACACACCTA AATAATAAAC CATTTAAGCC GATTAATTCT
CTTCAGGTTC AATCTGCTAT TGCTTTGCTT AATAATGCAC GTTATATAGT ATGTTGTCGT
GAAGATAAAA TAACTAGTAG TAATCCTAAC GCACCTTTTA TTACCTCTAC TCTACAACAA
GCAGCTAGTA CTCGTTTAGG CTATAGTGTT AAGCAAACTA TGCTCGTTGC TCAGCGCTTA
TATGAAGCTG GATATATTAC ATATATGCGT ACTGACTCAA CTAAAATTAG TGATGAGGCA
ATTAATATTG TTCGTAACTA TATCTTAGAT ATTTTCGGGA GCAAATATTT ACCTAATCAG
CCAAATCAAT ATCTAAGTAA AAAAAATAGT CTAGAAGCAC ACGAGGCAAT ACGTCCATCT
AATCTTCATA TATTAGCTGA ACAACTAGAA AATATAGAAG AAGATGCACG TAAACTTTAT
CAATTAATTT GGAGACAATT CGTCTCTAGC CAAATGATGC CTACACAGTA TAATTATACA
AAAATTAACG TAATAGCTGG AGATTTCCAG CTTAGTACCA CTGGCCGAAC ATTACACTTT
GATGGTTGGA GTAAAGTTAT GCCAATTCTA CATAAGGAAA ATGAAGAAAG TATCTGTCAA
TCAATATCTG TTGGTCAGAT ACTTTCTTTA CAACAATTAA TTTCACAACA AAATTTTACT
AAGCCACCTT TACGTTATAC TGAAGCTTCC TTAGTAAAGG AACTAGAAAA ACGGCGTATT
GGCCGACCAT CTACATATAT GTCTATTATA GATTCTATTC AAGATCGTGG TTATGTAAAA
CTAAATAACC ACCGTTTCTA CGCAAAAAAA ATTGGACAAA TTGTTACAGA TCGTTTAGCT
GAAAATTTTA GCGAACTAAT GAATTATGAC TTTACAGCTA ATATGGAAGA TACTTTAGAT
AAAGTAGCTA CTAATCAGCA AGATTGGAAA AATGTACTTG ATACTTTCTT TATTAAATTA
AACCAACAGT TAGAAAAAGC TAAAAAATCT CCCACAGAAG GAGGTATGCT ACCTAATAGT
ATAGTTACTA CTAGCATAAA TTGTCCTATT TGTGGTAGAA TGATGGGTAT TTGTACAGCA
AATACTGGTG TATTTCTTAG TTGTTCTGGT TATAAACTAC CACCTAAGGA ACGTTGTAAA
CATACTATTA ATCTCATCTC TGAATCAGAA TGGCTAAAAA AACTAGATAA CGAAAACAAA
AGTATTGATA CACAAAAAGT ACGAAGTCGA TGTATAAAAT GTAATAATAT AATGGATAGC
TATTATTTTA ATAATAATAG TATGTTAAAT ATATGTAATA ATAATCCTTT ATGCGATGGT
TATGAAATTG AGCAAGGTCT ATGTTTACTA AATACTGATT ATGGTACCTT AGTACCATGC
GAAAAGTGTA GTGCTAATAT GCAATTAAGA ATAGGTAGGT TTGGTAAATA TATTGCTTGT
ACTAATAATA CATGCAAAAA TACTCGGAAT ATTTTACGTA ACGGCGATAT AGCACCACCA
AAGATGGAGT TAATCGAGTT TCCAGAGCTA CCTTGCAAAA ATTCTAATGC TTATTTTGTT
TTGCGCAATG GTGCTGCAGG GGTTTTTCTA GCAGCTAATA CTTTTCCAAA AGTACACGAA
ACTCGCGCAC CTCTAGTTGA AGAGTTAGTT AAATTTAAAG ATCGCCTACC AACAATGTTA
CGTTACCTAA CAGAAGCACC GATACAGGAT GACCAAGGCA ATAAGACTTT AGTAAGGTTT
AGCCGTAAAA AGAAACAGCA ATATATCTCT TCTGAAAAAG AAGGTAAGGC TACTAGTTGG
AAAGCTTTTT TTATAAACGG TCATTGGCAA GTTTATAATA AAGAAGATCA GTAA
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| Protein sequence | MNKALVIVES PAKAKTINKY LGNQYLVKSS IGHIRDLPIH RETVKQQGKT NYQNTLANRM
GIDPYNNWFA NYEILPGKEK LVNELKALAN KAKHIYLATD LDREGEAIAW HIREVIGGDN
SKFSRVVFNE ITCNAITQAF QSPRELNLHR INAQQTRRFM DRIVGYMISP LLWKKIARGL
SAGRVQSVAV KLIVEREREI KQFSPIEYWD LYSYLQGPKD IVLKMQVTHL NNKPFKPINS
LQVQSAIALL NNARYIVCCR EDKITSSNPN APFITSTLQQ AASTRLGYSV KQTMLVAQRL
YEAGYITYMR TDSTKISDEA INIVRNYILD IFGSKYLPNQ PNQYLSKKNS LEAHEAIRPS
NLHILAEQLE NIEEDARKLY QLIWRQFVSS QMMPTQYNYT KINVIAGDFQ LSTTGRTLHF
DGWSKVMPIL HKENEESICQ SISVGQILSL QQLISQQNFT KPPLRYTEAS LVKELEKRRI
GRPSTYMSII DSIQDRGYVK LNNHRFYAKK IGQIVTDRLA ENFSELMNYD FTANMEDTLD
KVATNQQDWK NVLDTFFIKL NQQLEKAKKS PTEGGMLPNS IVTTSINCPI CGRMMGICTA
NTGVFLSCSG YKLPPKERCK HTINLISESE WLKKLDNENK SIDTQKVRSR CIKCNNIMDS
YYFNNNSMLN ICNNNPLCDG YEIEQGLCLL NTDYGTLVPC EKCSANMQLR IGRFGKYIAC
TNNTCKNTRN ILRNGDIAPP KMELIEFPEL PCKNSNAYFV LRNGAAGVFL AANTFPKVHE
TRAPLVEELV KFKDRLPTML RYLTEAPIQD DQGNKTLVRF SRKKKQQYIS SEKEGKATSW
KAFFINGHWQ VYNKEDQ
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