Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0224 |
Symbol | pfs |
ID | 4056346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | + |
Start bp | 239976 |
End bp | 240665 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637981577 |
Product | MTA/SAH nucleosidase |
Protein accession | YP_588678 |
Protein GI | 94676933 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATTG GCGTTATAGG AGCAATGGAA CAAGAAGTAA TGTTGCTTAG TAAGCAATTA GCCAAACTAA ATATATGGCA ACAGGCTAGA TGTAATATTT ATAGTGGTTG GTTGCATGGA AAAAAAGTAG TCTTAGTCCA ATCAGGGATT GGAAAGGTAT CAGCTGCATT AGGCTGTACG CTACTACTAA CTAATTTTGA AGCAACATTA GTTATTAACA TAGGTTCAGC TGGCGGTTTA TCACCGGCAT TAGCAGTTGG TGATATTATT GTATCGGAAG AAGTACAATA TCACGATGTT AATGTAACAG CTTTTGGCTA TGATAAAGGA CAAATGGCTC AATACCCATT ATTATTTCCA GCGTCGCCTT CGTTAGTAGC TTTAACTAAG CAACTAACAG AACATACTAA TATAAATGTC GTATGCGGTC AAATTATTAG TGGCGATATA TTTATTAATG GCGGACAAGA GTTATATAAG CTTAAACGTA GATTTCCACA AGCAATAGCA GTAGATATGG AAGTAACTGC TATTGCTCAG ATATGTTATC TGTTTGCTGT CCCCTTTGTA GGGATCCGTG TTATTACGGA TATAGCTGAC TCTGTTTCTC ATAAGAGTTT TAAAGATAAC CTAATAACAG TAGTATCTCA TTTATCATTA CTAGTATCAG ATATAATACA AGCTTTATAA
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Protein sequence | MIIGVIGAME QEVMLLSKQL AKLNIWQQAR CNIYSGWLHG KKVVLVQSGI GKVSAALGCT LLLTNFEATL VINIGSAGGL SPALAVGDII VSEEVQYHDV NVTAFGYDKG QMAQYPLLFP ASPSLVALTK QLTEHTNINV VCGQIISGDI FINGGQELYK LKRRFPQAIA VDMEVTAIAQ ICYLFAVPFV GIRVITDIAD SVSHKSFKDN LITVVSHLSL LVSDIIQAL
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