| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0211 |
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| Symbol | ispD |
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| ID | 4056500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 224342 |
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| End bp | 225067 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637981565 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_588666 |
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| Protein GI | 94676894 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTGTT TAACCAGACC ATTGCCCAAT GTTGTTGCTA TTTTGCCTGC TGCTGGCAAA
GGTCGTCGTA TGCAAACAAC ATTTCCTAAA CAGTATCTTA CTATTGGTAA CAAAACTTTA
CTTGAACTAA CAATATATAC CCTGTTACGT CAGCCTTGCA TAAGTCAAAT TATTGTTGCT
ATTAGTCCCG ATGATTATTG GTTTGCTCAG TTACCAATTG CTGCTGAAGA GCGAGTGATG
GTAGTTACTG GTGGTAGTAA ACGCGTATAT TCAGTCATGC GCGCATTACG CTATGTTAAA
CATGTATCCT GGGTACTAGT TCATGATGCT GTTCGTCCAT GTTTACACCA GGAAGATCTA
ATTTGTCTAC TAACGATTAC GGCGCACTCT ACAGTTGGAG GTATCTTAGC AACACCTGTA
CGTGACACTA TAAAACGTGC TGGTAATATC GCTAATGTGA AAACTATTAA TTATACTGTT
GTCCGTAAAG ATTTATGGCA TGCGCTGACA CCACAATTAT TTATGCTTGA ATTACTAAAG
AGTTGTCTTC AGCGAGCACT AAAAGAAGGT GTAACTGTAA CAGATGAGTC TGCTGCATTA
GAGTATTGCG GATACCAACC TTTATTAGTA CCTGGTAGGG CAGATAATAT TAAAGTTACT
TGGCCAGAAG ATCTACAGCT CGCAAGCTTT TATTTATCTC AATTAACTAA CACTCACAAC
AAATAG
|
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| Protein sequence | MTCLTRPLPN VVAILPAAGK GRRMQTTFPK QYLTIGNKTL LELTIYTLLR QPCISQIIVA
ISPDDYWFAQ LPIAAEERVM VVTGGSKRVY SVMRALRYVK HVSWVLVHDA VRPCLHQEDL
ICLLTITAHS TVGGILATPV RDTIKRAGNI ANVKTINYTV VRKDLWHALT PQLFMLELLK
SCLQRALKEG VTVTDESAAL EYCGYQPLLV PGRADNIKVT WPEDLQLASF YLSQLTNTHN
K
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