| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0137 |
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| Symbol | trmE |
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| ID | 4056683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 150941 |
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| End bp | 152314 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637981493 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_588606 |
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| Protein GI | 94676628 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.210433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA CTTTTGATAC TATTGCAGCC CAAGCTACAC CGAATGGACG CGGGGGTATA
GGTATTGTAC GGGTATCAGG TACTCTAACA ACTAGAGTAG CTAAAGAATT ACTAGGTAAG
GTACCTATTC AACGAAAAGC AGAATATCTT ACTTTTTATC ATCAAAATGG TAATATAATA
GATAAAGGGA TTGCTTTATT TTTTCCTGGG CCCAATTCTT TTACTGGGGA AGATATCTTG
GAATTACATG GACACGGTGG TCCAGTTGTA TTAGATCTAT TACTTCAACG TATTATCACT
TTACCGGGAG TACGTATTGC TCGTCCTGGT GAATTTTCAG AGCGCGCTTT TCTTAATGAA
AAAATTGATT TAGCACAAGC AGAAGCTATA GCTGATTTAA TTGATGCTAA TTCAGCACAA
GCTGCACGTG CGGCAATTTC TTCTCTACAA GGAGTTTTTT CCACTACAAT TAATGATTTA
GTAGAAAAAT TAACTAGTTT GCGTGTTGAT ATTGAGGCAA AAATTAATTT TCCAGAAGAA
AATGAAACTA ATGTATCTAT AGATAAAAAG ATAATAGCTA ATTTAGATCA AGCAATATTA
AGTATAAATA AAATACGTAC TGCAGCATAT CAGGGATGCA TATTACGTGA AGGTATAAAA
ATAGTTATAA CGGGTAAACC AAATGTAGGT AAATCAAGTA TTATTAATGC ACTCGCTGGT
CATGAAGTAG CTATAGTTAC TAATATAGCA GGTACTACTC GTGATATATT ACGAGAATAT
ATCTATTTAG ATGGAATACC AGTTTCTATT ATTGATACTG CTGGTTTATG CAATGTAAGT
CATAATGAGG TAGAAAAAAT TGGTATTCAA CGAGCTTGGA ATGAAATAAA ACAAGCTGAT
CATATTTTGC TTGTAGTAGA TAGTTCTACT ACTAAACTAA GCGAACAAGA TAAATTATGT
AACACACTAA TAGCTAATTT TCCATATAAA ACACCAGTAA CCATTATACG TAATAAAGCA
GATATAACAG GTGAAAAAAT CGGAGAAACA CTGAATAATA ATTATTCAGT CATTACGATT
TCAGCATTGT CTAGTTTAGG TATAGAGATA CTACTAAAAT ATTTAACAAA AATAATAAGC
TTACCTTCTA GTACAGAAGG TGTTTTTTTA GCACGTCGTC GTCATCTGGA AGCATTAGAA
ATAACAGCTA ATTATCTTTT ACAATGTAAA GAGAAAATTT CATTCCCCAC TATGCTAGAA
TTAATAGCAG AAGATTTACA GTTAGCTCAT AATGCTCTTA GTCAAATTAC TGGTAAATTT
AGTTCTCATG AATTACTAAA AAAGATTTTC TCTCGTTTTT GTCTTGGGAA ATAA
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| Protein sequence | MNLTFDTIAA QATPNGRGGI GIVRVSGTLT TRVAKELLGK VPIQRKAEYL TFYHQNGNII
DKGIALFFPG PNSFTGEDIL ELHGHGGPVV LDLLLQRIIT LPGVRIARPG EFSERAFLNE
KIDLAQAEAI ADLIDANSAQ AARAAISSLQ GVFSTTINDL VEKLTSLRVD IEAKINFPEE
NETNVSIDKK IIANLDQAIL SINKIRTAAY QGCILREGIK IVITGKPNVG KSSIINALAG
HEVAIVTNIA GTTRDILREY IYLDGIPVSI IDTAGLCNVS HNEVEKIGIQ RAWNEIKQAD
HILLVVDSST TKLSEQDKLC NTLIANFPYK TPVTIIRNKA DITGEKIGET LNNNYSVITI
SALSSLGIEI LLKYLTKIIS LPSSTEGVFL ARRRHLEALE ITANYLLQCK EKISFPTMLE
LIAEDLQLAH NALSQITGKF SSHELLKKIF SRFCLGK
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