| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0125 |
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| Symbol | dapF |
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| ID | 4056212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 137966 |
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| End bp | 138790 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637981481 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_588594 |
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| Protein GI | 94676850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTTT CTAAAATGCA CGGTCTTGGT AATGACTTCA TGGTAGTTGA TGTAGTCACA
CAAAATGTTT ATTTGTCACC CACTAAAATT CGTTTCCTAG CAAATAGGCA TAGCGGAGTT
GGATTTGATC AGTTACTATT CGTAGAACCT CCATATGATC CAGAAATAGA CTTTCATTAC
CGAATTTTTA ATGCGGATGG TAGTGAAGTA ACACAATGCG GTAATGGAGC ACGTTGTTTG
GCACATTTTG TTAGAATGAA AAAACTAACA AATAAACGTG AAATTTATAT TAGTACTCAA
ACTAGTCGTA TGGTACTCAC CATAATAGAA AATAATATGG TACGCGTAAA TATGGGCGTA
CCAAAGTTCG AGTTACCCCA AATACCGTTT GATATGCATC AAATAGAAAA GAAAGAAATT
TTATATCTAG CAAAAAACTA TATTTTTGGT GGTATTGTAT CGATAGGTAA CCCACATTGT
ATTATGATAG TTAATAACGT AGATAGTGCT CAAGTAAGTA TAATTGGTCC AATATTAGAA
ATACATAAGT ATTTTTCGGA AAGAACTAAC GTTGGTTTTA TGCAAGTTAT CAACAGAGAA
CAAGTTCTAC TACGTGTTTA TGAACGAGGT GTTGGTGAAA CCCAAGCATG CGGTAGCGGA
GCATGTGCAG CTGTTGCTAT TGGCATTAGA TTAGGTTTAC TCGCGGAGCA AGTACAAGTA
GCTTTACCAG GTGGTAAACT GGTAATCTAT TGGCGTGGAC CTGGTCAATC ACTTTATATG
ACTGGACCAG CTGTTCATAT TTATGATGGA TTTATCAATG ATTAA
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| Protein sequence | MQFSKMHGLG NDFMVVDVVT QNVYLSPTKI RFLANRHSGV GFDQLLFVEP PYDPEIDFHY
RIFNADGSEV TQCGNGARCL AHFVRMKKLT NKREIYISTQ TSRMVLTIIE NNMVRVNMGV
PKFELPQIPF DMHQIEKKEI LYLAKNYIFG GIVSIGNPHC IMIVNNVDSA QVSIIGPILE
IHKYFSERTN VGFMQVINRE QVLLRVYERG VGETQACGSG ACAAVAIGIR LGLLAEQVQV
ALPGGKLVIY WRGPGQSLYM TGPAVHIYDG FIND
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