Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0085 |
Symbol | rnt |
ID | 4056330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | + |
Start bp | 99313 |
End bp | 99969 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637981444 |
Product | ribonuclease T |
Protein accession | YP_588563 |
Protein GI | 94676709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.169544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAA AAGACGAAGT AAATACTCTA CGTGCCCGTT TTCGTGGTTT TTATCCTGTA GTAATTGATG TCGAAACCGC TGGTTTTAAT TCTGGTACTG ATGCTTTACT AGAAATTGCG GCCATAACTC TTCAAATGGA CCATCATGGA TGGCTAAAAA CCCATAAAAC TCTACACTTT AATATAGAAC CTTTTCCTGG TTCCATATTA CAACCAGAAG CACTAATATT TAATGGTATT GATCCAGATA ATCCTTTACG TTATGCTGTT ACTGAACGTG AAGCATTATA TGAGCTATTT ACAATAGTAC ATCAAGGAAT AAAAGATGAC GATTGTCATC GTGCTATTTT AGTTGCACAT AATGCTGCTT TTGACCATAG TTTCCTAATG GCGGCGGCTA ATCGCACAAA GATAAAGCAT AATCCTTTCC ATCCTTTTGC TACTTTTGAT ACTGCTGCTC TTAGTGGTTT AGTACTTGGT CAAACAGTAT TATTAAAAGC TTGTTTGACC GCAGGAATAC CTTTTAATAC TAGTGAAGCA CATTCAGCTT TATATGATGC TGAGCGTACA GCAGAACTAT TCTGTGAACT AGTAAATCGC TGGAAACGTT TAGGTGGTTG GACTAAAGTG ACTACTTCTA GTATCCACAG TGTATAA
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Protein sequence | MAEKDEVNTL RARFRGFYPV VIDVETAGFN SGTDALLEIA AITLQMDHHG WLKTHKTLHF NIEPFPGSIL QPEALIFNGI DPDNPLRYAV TEREALYELF TIVHQGIKDD DCHRAILVAH NAAFDHSFLM AAANRTKIKH NPFHPFATFD TAALSGLVLG QTVLLKACLT AGIPFNTSEA HSALYDAERT AELFCELVNR WKRLGGWTKV TTSSIHSV
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