| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0059 |
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| Symbol | rpoH |
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| ID | 4056725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | + |
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| Start bp | 70343 |
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| End bp | 71203 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637981418 |
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| Product | alternative sigma factor RpoH |
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| Protein accession | YP_588537 |
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| Protein GI | 94676476 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.314637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAG ATAGGTCTGT TTTAGTTATA ATTGATAAAA AAGGTAGTCT AGAAGACTAT
GTGAAAGCAG CTAATGCTTA TCCAATGCTT ACAGCAGAAG AAGAACTTAA ATTAGCTGAG
AAACTACATT ATCAAGGTGA TATAGAAGCA GCTAAGTTAC TCATATTATC CCACCTACGT
TTTGTTATTA ACATTGCACG TACCTATTCA GGTTATAATT TACCTCAAGC GGACTTAATT
CAAGAAGGTA ATATTGGTCT AATGAAAGCG GTTAGAAAAT TTAACCCAGA AGTTGGGGTA
CGCCTAGTAT CTTTTGCTGT ACACTGGATT AAAGCAGAAA TACATGAATA TGTATTACGT
AACTGGCGTA TTGTTAAGGT TGCTACTACT AAAGCACAAC GTAGATTATT CTTTAATCTA
CGTAAAATTA AGCAGCGTTT AGGCTGGTTT AATCAGGAAG AAGTAGAAAT GGTTGCTAAA
GAGCTAGGAG TAACCAGTAA GGATGTTCGT GAGATGGAAT CTCGCATGGC AGCACAGGAT
ATTGCTTTTG ATCCTATACC TAATGATGAA GTACCAGATA AGCTTTTGAT GGCACCAATA
CTTTATTTAC AAGATAAAGG TTCTGATTTT GCAGATCGCA TTGAAGAACA AAACTGGGAG
TATCATGCAG CAGATAAGCT AAATATTGCG CTAGATAAAC TAGATGAACG TAGCAAAAAT
ATTATTGCTG CTCGTTGGTT GGATAACAAA AAGAGTACTT TGCAAGATTT AGCTAATAAG
TACGGTGTAT CAGCAGAGCG AATTCGTCAA TTAGAAAAGA ACGCTATGAA AAAAATACGC
ATGGCTATTG AAGCACAATA A
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| Protein sequence | MIKDRSVLVI IDKKGSLEDY VKAANAYPML TAEEELKLAE KLHYQGDIEA AKLLILSHLR
FVINIARTYS GYNLPQADLI QEGNIGLMKA VRKFNPEVGV RLVSFAVHWI KAEIHEYVLR
NWRIVKVATT KAQRRLFFNL RKIKQRLGWF NQEEVEMVAK ELGVTSKDVR EMESRMAAQD
IAFDPIPNDE VPDKLLMAPI LYLQDKGSDF ADRIEEQNWE YHAADKLNIA LDKLDERSKN
IIAARWLDNK KSTLQDLANK YGVSAERIRQ LEKNAMKKIR MAIEAQ
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