Gene BCI_0041 details

Gene Information

• Locus tag: BCI_0041
• Symbol: thiC
• ID: 4056682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: +
• Start bp: 51358
• End bp: 53226
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637981400
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_588519
• Protein GI: 94676627
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.321035
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAT CATCAATACC TGCTTCACGC CGAGTGAGCC GTGCAAAAGC ACAGGCTTTT 
ATGGATAGCT TAACAGGTAG TAGCTATTTT CCTAACTCAA GAAGGATATA TTTACAAGGT 
AAAACACCTT CAGTACATGT ACCAATGCGT GAAATTAAGC TACATCCTAC ATTGATCGGT 
AAAAACGGTG AACATTATGA GGATAATCAA CCTATACCAG TTTATGATAC TTCAGGTCCT 
TACGGTGATC CTACTATAGC AATTAACGTA CGTACAGGTC TTAACCGGTT ACGCGAGATA 
TGGATTCTTG CACGACAAGA TAGTGAGCCA ATAAGTAATA ATAATAACGA TCGTCAGAGT 
TCAGATAAAC AGTTAAGTTT TACTACTAAC TATAATCCAC GCCGAGCTAG CTATGGACGC 
TGTATTACAC AATTACATTA CGCACGTGCC GGTATCATAA CGCCAGAAAT GGAGTTTATA 
GCTTTACGTG AAAATATGGG CCGAGAACGT ATTAGTAGCA ACGTGCTACA TCAGCAGCAT 
TTAGGTTCTA ACTTTGGTGC TAAAAAAGCT GATCATATTA CAGCAGAATT TGTCCGGCAG 
GAAGTAGCAG CAGGACGTGC TATTATACCT AGTAATATTA ATCATCCAGA ATCTGAGCCA 
ATGATCATTG GCCGTAATTT TCTCGTAAAA GTAAATGCAA ATATTGGTAA CTCAGCAGTA 
ACATCTTCTA TTGAGGAAGA AGTCGAAAAG TTAGTATGGG CTACTCGTTG GGGAGCTGAT 
ACAGTCATGG ACTTATCTAC TGGTAGTTAT ATTCACGAAA CTAGAGAATG GATATTACGT 
AATAGCCCAG TACCTATAGG TACTGTACCT ATCTATCAAG CGTTAGAAAA AGTAAATGGA 
GTCATAGAAA ATCTTAATTG GGATATTTTC TACGAGACAT TATTAGAACA AGCTAACCAA 
GGAGTAGATT ATTTTACGAT TCATGCTGGC GTATTAAAAC GTTATGTTCT ACTAACAGCT 
AGTAGGTTAA CTGGTATCGT ATCGCGTGGT GGCTCTATTA TGGCTCAATG GAGTTTAGTA 
CATAATCAGG AAAACTTCCT TTATGAGCAT TTTAGTGAAA TTTGCAAGCT TTGTGCTGCT 
TATGATATTG CTCTATCTCT TGGAGATGGT CTAAGACCCG GTTCCGTACA AGATGCTAAT 
GATGAAGCAC AATTTTCTGA GTTACATACA CTAGGCGAAT TAACTAAAAT TGCCTGGGAA 
TATGATGTGC AAGTAATGAT CGAAGGACCT GGTCATATTC CACTACATAT GATTGAGCGT 
AATATGACTG ATCAACTTAA ATATTGCCAC GAAGCACCAT TCTACACTCT CGGACCACTC 
ACAACAGATA TTGCTCCTGG TTATGACCAC TTTACTTCAG GTATTGGTGC CGCACTAATA 
GGCTGGTTTG GATGTGCTAT GCTGTGCTAT GTAACTCCTA AAGAGCATCT AGGTTTACCT 
AATAAGGAAG ACGTAAAACA GGGTTTAATT GCCTATAAAA TTGCCGCACA TGCTGCAGAT 
CTAGCTAAAG GACATCCTGG TGCTCAAATA CGTGATAATG CTATGTCAAA AGCTCGTTTC 
GAATTTCGCT GGGAAGATCA ATTTAACTTA GCTTTAGATC CTTTTACGGC GCGTATGTAT 
CACGATGAAA CTATACCGCA AACAGCAGGA AAATTAGCAA ATTTTTGCTC GATGTGTGGT 
CCTAAGTTTT GTTCTATGAA GCTATCAAAA AAAATACGTA ATTACACTAA TATGAAAAAT 
ATAAAAACTA TTAGTAATAG TTTCATGAAT AAATTAGATA ATAGCGGTAT TAAAAATGCT 
GACCGATAA 

 

Protein sequence

MSRSSIPASR RVSRAKAQAF MDSLTGSSYF PNSRRIYLQG KTPSVHVPMR EIKLHPTLIG 
KNGEHYEDNQ PIPVYDTSGP YGDPTIAINV RTGLNRLREI WILARQDSEP ISNNNNDRQS 
SDKQLSFTTN YNPRRASYGR CITQLHYARA GIITPEMEFI ALRENMGRER ISSNVLHQQH 
LGSNFGAKKA DHITAEFVRQ EVAAGRAIIP SNINHPESEP MIIGRNFLVK VNANIGNSAV 
TSSIEEEVEK LVWATRWGAD TVMDLSTGSY IHETREWILR NSPVPIGTVP IYQALEKVNG 
VIENLNWDIF YETLLEQANQ GVDYFTIHAG VLKRYVLLTA SRLTGIVSRG GSIMAQWSLV 
HNQENFLYEH FSEICKLCAA YDIALSLGDG LRPGSVQDAN DEAQFSELHT LGELTKIAWE 
YDVQVMIEGP GHIPLHMIER NMTDQLKYCH EAPFYTLGPL TTDIAPGYDH FTSGIGAALI 
GWFGCAMLCY VTPKEHLGLP NKEDVKQGLI AYKIAAHAAD LAKGHPGAQI RDNAMSKARF 
EFRWEDQFNL ALDPFTARMY HDETIPQTAG KLANFCSMCG PKFCSMKLSK KIRNYTNMKN 
IKTISNSFMN KLDNSGIKNA DR