Gene BCI_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCI_0017 
SymbolmetE 
ID4056528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBaumannia cicadellinicola str. Hc (Homalodisca coagulata) 
KingdomBacteria 
Replicon accessionNC_007984 
Strand
Start bp22990 
End bp25284 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content37% 
IMG OID637981377 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 
Protein accessionYP_588496 
Protein GI94676804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID[TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.352341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTT TAAGTCATAT ATTAGGTTTT CCGCGCATCG GCTTACACCG TGAATTAAAA 
AGAGCACAGG AAAGTTATTG GGATGGGCAT ATAACTCAGC AGCAGTTACT AAATACAGGG
CGAGAACTAC GTGCGTGTCA CTGGCAACAG CAGAAACAAG CTGGTTTAAA TATGCTTCCA
GTAGGTGATT TTGCCTGGTA CGATCATGTT CTTACTACTA GTCTAATGCT AGATAATGTG
CCAGTACGTC ATCGTAATGA CGATGGTTCT AGTAATATTG ATACCTTATA CCGCATTGGG
CGGGGCAACG CACCAACTGG TCAACCAGTA GTAGCATCTG AAATGACTAA ATGGTTTAAT
ACAAACTACC ATTATATTGT GCCAGAATTT ACCGTTGGTC AGCAATTTCG CTTAGGCTGG
ACTCAATTAA TAGAAGAAGT TGACGAAGCA TTAGCATTAG GTTATAATAT TAAACCAATA
CTACTTGGTC CAATTAGCTA TCTGTGGCTA GGTAAAGCTA AGGAAAAGCA TTTTGACCGA
CTATCACTAT TATCAGCATT ATTACCTGTT TATCAGCAGA TATTAGCATT ACTGGCTCAA
CGTGGTATCG AATGGGTTCA AATTGATGAG CCAGCGTTAG TACTTGAGTT ACCAACAGCA
TGGTGTAATG CTTACTATGA TGCCTATACA GATGCTCTAC AAGGATATAG TAAATTACTA
CTAACAACTT ATTTTGATAG CATCGGGCAT CATCTGAATA TCATAACTAA TTTATCAGTA
CATGGTTTAC ATGTTGATTT AATTGCCGGA AATGATGATG TAGAAGTTTT ACATCGTACT
CTACCATCCA ACTGGGTACT GTCTGCCGGA GTAATAAATG GCCGTAATGT TTGGCGTGCT
GATTTACCAA GTAAGTTTAA GCAACTACGT TCATTAGTTG GTCAGCGAGA ACTTTGGGTA
GGATCATCTT GTTCGCTATT ACATAGTCCT ATCGATTTAA GCATTGAGAC TAGAATGGAT
CCAGAAGTAA AAAGTTGGTT TGCTTTTACT ATACAAAAAT GTAATGAATT AAAATTATTA
TGTAATGCGC TTAATAGGTT AGATGATACT AAATATCAAG CAATATTAGC TGACTATAGT
GCACCTCTGT GGGCACGTCA GACATCAGAA AAAGTTCACA ATCGACAGGT TAAAATACGG
ACAGAGCAAA TTACTGAAAA TCATAGTCAA CGCCAGCAAC ATTACTTAGA TCGAATAAAT
GTTCAGCGTG CACGATTCAA TTTACCAATA TTACCTACAA CTACTATTGG TTCTTTCCCA
CAAACTACTG CAATACGCAG TTTACGTCTT GATTTAAAAA GTGGTCGAAT AGATAACGAG
TATTATAAAA ACGCTATTTG TAACCATATT AAGCAAGCAA TTACTGAACA AGATGCATTA
GGACTAGATG TTTTAGTACA CGGAGAGGCT GAACGTAATG ATATGGTAGA ATATTTTGGT
GAGCATTTAA ATGGCTTTAT ATTTACCCAG AATGGATGGG TACAAAGTTA TGGCTCTCGT
TGTGTGAAAC CACCAATTAT AATTGGTGAT ATCAGTCGTC CAAAACCAAT TACCGTAGAA
TGGGCATGGT ATGCTCAATC TTTGACTCAA AAACCAGTAA AAGGTATGCT AACTGGACCA
GTAACAATTC TGTGTTGGTC TTTTCCACGT GAAGATCTTG ACCGTAAAAC TATTGCTAGG
CAAATAGCTT TAGCATTACG TGATGAAGTA ATAGATCTAG AAAATGCTGG TATAGGAATT
ATTCAAATTG ATGAACCTGC TTTACGTGAA GGTTTACCTT TAAAATATTC TGCGTGGAAA
GAATATTTGA CTTGGGCCGT AGAAGCATTC CGCTTAAATG CAGCAGTAGC TAAAAATAAT
ACACAGATTC ACACTCATAT GTGTTATAGT GAATTTAACG ATATTATGGA TTCTATCATT
GCAATGGATG CCGATGTAAT AACGATTGAA ACTTCTCGTT CTAATATGAA GTTACTTGAT
ACCTTCAAAC AATACCAATA TCCTAACGAT ATTGGACCTG GAGTATATGA TATTCATTCA
CCTAACATAC CTAGCGAAGA TGATATAATT CAGTTACTAC GTAAAGCGGC TCAAGTTATA
CCAATAAAAC GTTTATGGGT TAATCCAGAC TGCGGTTTAA AAACTCGTAC CTGGTTAGAA
ACACGCAAAG CATTATCTAA TATGGTTAAT GCAGCACATA AACTAAGAAG AGAAGAAGAA
TATAACAGGT CATAG
 
Protein sequence
MTILSHILGF PRIGLHRELK RAQESYWDGH ITQQQLLNTG RELRACHWQQ QKQAGLNMLP 
VGDFAWYDHV LTTSLMLDNV PVRHRNDDGS SNIDTLYRIG RGNAPTGQPV VASEMTKWFN
TNYHYIVPEF TVGQQFRLGW TQLIEEVDEA LALGYNIKPI LLGPISYLWL GKAKEKHFDR
LSLLSALLPV YQQILALLAQ RGIEWVQIDE PALVLELPTA WCNAYYDAYT DALQGYSKLL
LTTYFDSIGH HLNIITNLSV HGLHVDLIAG NDDVEVLHRT LPSNWVLSAG VINGRNVWRA
DLPSKFKQLR SLVGQRELWV GSSCSLLHSP IDLSIETRMD PEVKSWFAFT IQKCNELKLL
CNALNRLDDT KYQAILADYS APLWARQTSE KVHNRQVKIR TEQITENHSQ RQQHYLDRIN
VQRARFNLPI LPTTTIGSFP QTTAIRSLRL DLKSGRIDNE YYKNAICNHI KQAITEQDAL
GLDVLVHGEA ERNDMVEYFG EHLNGFIFTQ NGWVQSYGSR CVKPPIIIGD ISRPKPITVE
WAWYAQSLTQ KPVKGMLTGP VTILCWSFPR EDLDRKTIAR QIALALRDEV IDLENAGIGI
IQIDEPALRE GLPLKYSAWK EYLTWAVEAF RLNAAVAKNN TQIHTHMCYS EFNDIMDSII
AMDADVITIE TSRSNMKLLD TFKQYQYPND IGPGVYDIHS PNIPSEDDII QLLRKAAQVI
PIKRLWVNPD CGLKTRTWLE TRKALSNMVN AAHKLRREEE YNRS