Gene Rmet_5936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5936 
Symbol 
ID4042800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp139884 
End bp140915 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID637981355 
Productputative monooxygenase with luciferase-like ATPase activity 
Protein accessionYP_588064 
Protein GI94314855 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03558] luciferase family oxidoreductase, group 1 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTT TCCCCATGAC TCCCTATTCC CTGCTCGACC TCTCGCCCAT CATCGAAGGC 
AGCGACGCCA CCCAGGCCAT GCGCAACACG CTGAGCCTGG CGCAGCACGC GGAACGTCTT
GGCTATCGGC GCTTCTGGCT GGCCGAACAC CACAACATGC CGGGCATTGC CAGTGCCGCC
ACGGCGGTGC TGATCGGGTA CGTCGCCAAC GGCACCTCGA CGATCCGGGT CGGCTCCGGT
GGCATCATGC TGCCCAACCA TTCCCCGCTG GTGGTGGCCG AACAGTTCGG CACGCTGGCC
TCACTCTATC CGGGCCGGAT CGACCTCGGG CTGGGCCGCG CCCCCGGCAC CGACCAGGCC
ACGGCACGCG CGCTGCGCCG AACCCTGAGC CACGACTCGG CCGACTCGTT CCCGCAGGAT
GTGGAAGAAC TGCAAGCGTA CTTTGATGAG GTGCGACCCG GCCAGCGCGT GCGCGCCGTG
CCGGGCGCGG GGCTCAAGGT GCCGCTGTGG CTCCTCGGTT CCAGCCTTTT CGGCGCGCAG
CTAGCAGCGG CGATGGGCCT GCCTTTCGCG TTTGCTTCGC ACTTTGCCCC GGGCTTCATG
CGGCAGGCGG TAGACCTGTA TCGCCGCACC TTCCGCCCGT CGGAGCAGCT CGATCGTCCG
CACGTGATGC TTGGCCTCAA CGTGTTCGCC GCCGAGACCG ATGCCGAGGC GCGTCGCCTG
TTCAGTTCGC TGCAGCAGCA GTTTCTGGCG CTGGTTCGCG GCACGCCGGG ACAGCTCAAG
CCGCCGGTCG ACGATATCGA GCGTCTGTGG GATGCCAGCG AAGCGGAGCA TATCCGCCGG
TCCCTCGCCT GCTCGGTCGT GGGAGACCCG GCAACGGTAC GCGAGGGCAT CCAGCGTTTC
GTGGACGATC TGCGGCCGGA CGAGCTGATG CTGACCGGCC AGATCTACGA CCATGCCGCG
CGGCTGCGAT CGTTCGAGAT CGCAGCCGAT GCCATGCGCG CGCTACAGCC CGCATCATCG
CAGACGGCGT GA
 
Protein sequence
MQAFPMTPYS LLDLSPIIEG SDATQAMRNT LSLAQHAERL GYRRFWLAEH HNMPGIASAA 
TAVLIGYVAN GTSTIRVGSG GIMLPNHSPL VVAEQFGTLA SLYPGRIDLG LGRAPGTDQA
TARALRRTLS HDSADSFPQD VEELQAYFDE VRPGQRVRAV PGAGLKVPLW LLGSSLFGAQ
LAAAMGLPFA FASHFAPGFM RQAVDLYRRT FRPSEQLDRP HVMLGLNVFA AETDAEARRL
FSSLQQQFLA LVRGTPGQLK PPVDDIERLW DASEAEHIRR SLACSVVGDP ATVREGIQRF
VDDLRPDELM LTGQIYDHAA RLRSFEIAAD AMRALQPASS QTA