| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5928 |
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| Symbol | |
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| ID | 4042792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 129506 |
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| End bp | 132574 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981347 |
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| Product | putative membrane carboxypeptidase (Penicillin-binding) transmembrane protein |
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| Protein accession | YP_588056 |
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| Protein GI | 94314847 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACG TGTCACGTCG TGGCTGGATT CTCGTCGGGA TGACGGTCGC CGCATGCGGC
GGCACCTACA TCGTTGTGAG CCTCGTCGCG AATGAGGTTC GCACCTCGCA ATGGCAGGCT
CGGTACATGA GCCGGCTGGG CCAGTCGTTG ACGTACTCCA TCGAGCCCGG CCCCAGCGAC
AGCATCCGCT ATCCACACTC CGGCCCCTAC GACGAGCGAC TCGGCTACGA GCGCCTGGGT
GAGTTTGGCG AGCGTCTGCT CAAGCAAGGT TACGTGACCA GTTCCCAGGC GCGCATGTCG
CCCGACATGG TGCGACTGAT GGACAACGGC ATCTTTCCGC CCTATCGCGA GAAGAACCAG
GCCGGTCTGC TAGTGCGCGA CTGCAACGCG TTGACGCTGG CATTCGCGCG CTACCCGCAG
CGCCAATATG ACAACTTCGA GTCGATTCCG AAGGTGCTGA TCTCCTCGCT GCTCTATGTG
GAGAACCAGA ACCTGCTCAA TCCCGAGTAT CCGATGATGA ATCCGGCGCT GGATTGGCGC
CGGCTGTCGC GTGCGGTACT CGACCAGGGC ATCAAGTTCG CTGACCGGCA CCACGACACC
CCCGGCGGCA GCACGCTGGC CACACAGATC GAGAAGTACC GGCATTCCCC GAAGGGAAAA
ACGCAGTCGG TCTCCGAGAA GTTCCGGCAG ATGGCCTCCG CTTCACTGCG CGCCTACCAT
GACGGACCCG ACACGCAGCG CGTGCGCGAG AACGTCGTGC TGGACTATCT GAATACCGTG
CCGCTGTCGG CGCGAGTTGG CCACGGCGAG ATCAACGGTA TCGGCGACGC GCTTTACGTC
TGGTACGGCG AAGATTTCAG CGAGTTCAAC GCCGCGCTGC AGCAGATGAA TCCGCGTGAC
CCCACGCCAC GCGAAGCGCA GGCTTACAAG CGTGCGTTGT CACTGATCAT CTCGCAGCGG
CGTCCGTCGT ATCACCTGCG GCGCGATGAC ACGAACCTCG ATGCGCTGAC AGGTAGCTAC
CTGCGCCTGC TGGCTGCGAA CAACGTCATC ACGCCGGAGT TGAGAGACGC GGCGCTGGAG
CAGTCGTTGG ACAAGGCCCC ACCGCCGCCA CGCCCGGACG CCGAGCCGTG GGTCACGCGC
AAGGCCGTCA ACCAGGTCAG CAACGATGTC TCGCACATGA TCGGCATCAA CAGCCGCTAT
GACCTGGACC GGCTGGACCT GACCGTCGAC AGCACCATCA ATCGCGAGGC ACAGCGCCTG
GTTACCGATA CGCTGCTGCG GATGCGTGAC AAGGGCGTCG CGCACGAGAT GGGCCTGTAT
GGCAAGAACC TGCTACGCGA AGGCGATGAC CCATCGCGTC TCGTGGCCAG CTTCACGCTG
TTCGAGCGCG TTGGCAATGC GAGCGTGGTG CGCGTGCAGA CTGACAATGT TGACCAGCCG
TTCGACATCA ACGCCGGGGC GCGGCTCAAT CTCGGGTCGA CCGCCAAGCT GCGCACGCTG
GTGACGTATC TCGAGATCAT CAGCGAACTG CATGATCGCT ACGTGGACAT AAGCCGCGCC
GAGCTGACCG CGCTCCAGGT GCCGCGCCAG GATGTGCTGA CACGCTGGGC GGTCGACTAC
CTGATCGCCG CGAAATCCCC GGCTGACCGT CGGCTGGCCA CGATGCTCGA TGCCGCGATG
GAGCGCAAGT ATTCGGGCAG CGCCGGAGAG GCGTTCTTTA CCGGCGGTGG CATGCAGAGC
TTCTCGAACT TTGAGAAATG GGAAGGCGAG CACCAGATGA CAGTGCGCGT GGGTTTCCAG
CATTCGGTCA ACCTGGTGTT CGTGCGGATG ATGCGGGACA TCGTGCGTTA TGAGGTTTAC
CAGGCGCACC CTGACGCACG TGATTTGCTC GAGGACCGCT ACGCGCCCGG CCGTCGCGCT
TATCTCGAGC AGTTTGCCGA CGAAGAAGGT ACGGCGTTCA TGACCGCGTT CTACCAGCGT
TATCGCGGCA AGGACAACGA CGAGCGGCTC AAGGTGCTGC TCGGCCGGGT CAAGCAGCCG
ACGCCGCATC TGGCGGCCGT GCGGCTGTCC GTCACGTTAC TGAGCGCGCG GCCAAACACC
GATTTCGAGA CATACGCGCG CACGCTGCGC CAGTGGATGC CGAAGCAGAA GGAGACGCTG
TCGGACGAGG ACCTGCAGGC GCTGTATGTG AAGTACGGCC ACGACAAGTT CAACCTCAAC
GATCGGGGCT ACCTGTCGCG CATCCACCCG CTGGAACTGT GGATGGTCGA GTATTTGGGC
ACGCATCCGG ATGCGACGCT GAAGGAGATC CTGAAGGCGA GCGCGCCCGA TCGCCAGACT
GTCTATGCAT GGTTGTTCAA GACGCGCAGC AAGCTCGGTC AGGATGGCCG CATTCGCACG
CTGCTGGAAC GCGAGGCCTT TGGGAAGATC GCCACGCGCT GGCAACGGCT GGGCTATCCG
TTCGATTCGC TCACGCCGTC CTACGGCACG GCGATCGGCG CATCGGGTGA CCGGCCTGCC
GCGCTGGCCG AACTGGCGGG GATCATCCTG GCCAACGGGG TGGACGCCCA GCCCTCGGCG
GTGCGCGCGC TGGCCTTCGC GTCGGACACG CCCTACGCAA GCGCCTACCG GCTGCAACCG
GCGCCCGGCA AGCCGCTGAT CGTGCCGGAG ATCGCCATGC TGGTGCGGCG ATCCATGCTC
GATGTCGTGC AGAACGGCAC CGCCAAGTCC ATCAGCGGTG CGTTCGTGCC ATTGAATCGG
AAGGGGCAGG CGGTGGGGGC GCCATTGATC ATTGCCGGCA AGACCGGCAC CGGCGACCAA
CGCTTCCAGA CCTATGGCCC GGGTGGCCGC GTGATCTCGT CGCGCTCGGT CAGCCGCTCG
GCGACGTTCG TGTTCCTGCT CGGTGATCGC TATTTCGGCA CCGTGACGAT TCACGTGCGG
GAGCCCTACG CCGCGCGTTA CTCGTTCACC AGCGCATTGT CATTGCGGGT GCTGCGCTCG
CTGGCGCCGC AGATCACGGC GATGGTCGCG CCCGGCAGCG ACGCGACACT GCTCCGCTGC
GAGAACTGA
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| Protein sequence | MRNVSRRGWI LVGMTVAACG GTYIVVSLVA NEVRTSQWQA RYMSRLGQSL TYSIEPGPSD
SIRYPHSGPY DERLGYERLG EFGERLLKQG YVTSSQARMS PDMVRLMDNG IFPPYREKNQ
AGLLVRDCNA LTLAFARYPQ RQYDNFESIP KVLISSLLYV ENQNLLNPEY PMMNPALDWR
RLSRAVLDQG IKFADRHHDT PGGSTLATQI EKYRHSPKGK TQSVSEKFRQ MASASLRAYH
DGPDTQRVRE NVVLDYLNTV PLSARVGHGE INGIGDALYV WYGEDFSEFN AALQQMNPRD
PTPREAQAYK RALSLIISQR RPSYHLRRDD TNLDALTGSY LRLLAANNVI TPELRDAALE
QSLDKAPPPP RPDAEPWVTR KAVNQVSNDV SHMIGINSRY DLDRLDLTVD STINREAQRL
VTDTLLRMRD KGVAHEMGLY GKNLLREGDD PSRLVASFTL FERVGNASVV RVQTDNVDQP
FDINAGARLN LGSTAKLRTL VTYLEIISEL HDRYVDISRA ELTALQVPRQ DVLTRWAVDY
LIAAKSPADR RLATMLDAAM ERKYSGSAGE AFFTGGGMQS FSNFEKWEGE HQMTVRVGFQ
HSVNLVFVRM MRDIVRYEVY QAHPDARDLL EDRYAPGRRA YLEQFADEEG TAFMTAFYQR
YRGKDNDERL KVLLGRVKQP TPHLAAVRLS VTLLSARPNT DFETYARTLR QWMPKQKETL
SDEDLQALYV KYGHDKFNLN DRGYLSRIHP LELWMVEYLG THPDATLKEI LKASAPDRQT
VYAWLFKTRS KLGQDGRIRT LLEREAFGKI ATRWQRLGYP FDSLTPSYGT AIGASGDRPA
ALAELAGIIL ANGVDAQPSA VRALAFASDT PYASAYRLQP APGKPLIVPE IAMLVRRSML
DVVQNGTAKS ISGAFVPLNR KGQAVGAPLI IAGKTGTGDQ RFQTYGPGGR VISSRSVSRS
ATFVFLLGDR YFGTVTIHVR EPYAARYSFT SALSLRVLRS LAPQITAMVA PGSDATLLRC
EN
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