| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5911 |
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| Symbol | |
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| ID | 4042775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 110712 |
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| End bp | 113585 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981330 |
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| Product | peptidase M16-like protein, possible Zn-dependent |
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| Protein accession | YP_588039 |
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| Protein GI | 94314830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGTC TTGTCACCAG TTTTGCCGCC AGCTTCGTCA CCGGCGCGGC TTGCTTCATT
TTGGCGGGCC TGAGCGCCCT GCCCGTGCCC GCCTTCGCCG CGCGGCCGAG CAGTGTCGCG
CCCCCGCCAC CCGCAGCGCC GGTCATCCGC GCGGAGCGCG TGGCCGCCGT GGAAGGCATC
ACCGAGTACC GGCTGCCGAA CGGCCTCCGG ATCCTGCTCG CCCCCGACGA CGCCCAGCCG
ACCACCACGG TGAACATGAC CTACCTCGTG GGCAGCCGGC ACGAGAACTA CGGCGAAACC
GGCATGGCGC ACCTGCTCGA GCACCTGATG TTCAAGGGCA CGCCGTCATT GCCGGGCCGG
ACGATTCCCA CCGAGTTCGC CCGGCGCGGC ATGCAGTTCA ACGGCACGAC GGCGCAGGAC
CGCACCAACT ATTTCGAGAC CTTTGCTGCC AGCGACGACA ACCTCGACTG GGCGCTCCGG
ATGGAAGCGG ACCGCATGGT CAACAGCTTC ATCTCGCGCG CCGACCTCGA CAAGGAAATG
ACGGTCGTGC GCAACGAGAT GGAGATCGGT GAGAACAATC CGATGCGGAT GCTGCAACAG
CAGATGTACG CGGCGGCCTA TCGGTGGCAC AACTACGCCA AGGCGCCAAT CGGCGCGCGC
AGCGATGTGG AGCGTGTCGG CATCCAGAAC CTGCAGGCGT TCTATCGACG CTACTACCAG
CCCGACAACG CAGTGCTGGT GGTAGCCGGG CAGTTCGATC CGGTGCGTGC GCTGTCACGG
ATCGAGCAGG CGTTCGGGCC GATTCCGCGG CCCACGCGCG TGCTCCCGAC CGAGCACACC
GTGGAACCGC CGCAGGAAGG CGCCCGGGAA CTGACGCTGA CGCGCCCCGG GGACAGCAGC
ATCGTGGCCG CGATGTATCA CGTCGCGCCT GGCGCGCACC CCGACACCAC GGCCCTCGCG
CTGCTGACGG TCATCCTCGC CGACACGCCG GGAGGGCGGC TCGAGCATGC GCTGGTGGAC
ACGCGCAAGG CGGCATGGCA GATGTCGATG TTCGACGCGA TGAAGGATCC CGGCGTGATC
CTGTTCGCGG CAGGGACAGG CAAGGACCGG CCCATCGAGC CGGTGCGCGC GGCGCTGCTT
GCGGAAATCG AAGGACTGGC CGCAAAGCCA GTCACCCAGG ACGAACTGGA TCGCGCCCGC
GTGCGGATGC GTAACGCGTA CGAGAAGATT CTCAACGATC CGGCGCGCTA TGGCGTGGCG
CTGTCCGAAT CCATTGCAAA GGGCGACTGG CGCCTGCTCT TTATCGCGCG CGACCGCGTG
GAAACCACCA CGCTGGAAGA CGTACAGCGC GTGGCGGAGA ACTACCTGCG CCAGACGAAC
CGCACGGTCG GCGAGTTCCT GCCCGGAGAC AAACCCCAGC TTGCGACCAT TCCGCAGTCG
CCCGACGTGG CCGCGCTGGT ACGCGACTAC GCCGGCAAGG CTGTCGCGCA GGCCGTGCCC
ACGTTCGACC CAAGCCCGGC CAACATTGAC GCCCACACGG TGCGCCAGAC GCTTCCAAAC
GGGATGGAGC TTGCGCTGCT ATCCAAGCCC ACGCGCGGCG AAGCGGTCAA TGGCACGCTG
GTCCTGCATC TGGGCAATAC CCAGTCGCTG CAAGGGAAAA CAGCGATTGG CTCGCTGACG
GCCGGAATGC TCGACCGTGG CGCGGGCGTG TTCAGCCGCC AGCAGATTGC GGATCGGTTC
GAGGCGCTCA AGGCCAATGT ATCGATCTCG GGCAGTTCGG AGCGGCTGAC GGTACGGTTC
GAGACGCACC GTGCCTACCT GCCCGACCTG TTGGACCTGT TGCGAACGGT GCTGCGCATG
CCGACATTCC CGTCGGCCGA ACTGGAAACC CTGCGCGCCA GCAGTATCGC GGGGGTAGAC
AGCCAGCGTC GCCAGCCCAA CGCGCTGGCA CCGAACGCCC TCGGGCGCCA TGGCAACCCA
TATCCGGCCG AAGATCCACG CTACACGCCA ACCTTCGACG AAAGCGTGGC CAGCCTCAGG
GGCGTGACGC AGGCCGATCT GCGCGAGTTC CATGCGCAGT TCTACGGCGC CGACCACGCG
CAGCTTGCGA TCGTCGGTGA CTTCGATGCC GCCGACGCCG CGAAGCAGAT CCAGTTCCTG
TTCGGCGACT GGCGGGCCCA GGTACCGTTC GAACGCGTGG ATCGCCCGTT CATCGCCATT
CCGGCGGCCA GCTTCACACT CGACACGCCT GGCAAGGCCA ACGCTGTGTA CCTGGCATCG
CAACCCGTCG ATCTGCTCAA CGACTCGCCG GACTACCCGC TGATGCTGAT CGCAGCCAGA
GTGCTCGGCG GCACCGGTAT GCGCAGCCGG TTGGCCGATC GGTTGCGGCA GCAGGAAGGC
ATCAGCTATG GCGTCTCGAG CTCGCTGTCG ATTGGCGCAC TCGACCGCGC AGGACGCTTT
GCCTTATGGG CCGTCTACGC ACCGCAGAAC CAGACGCGCC TGCGCGACGC GGTGGGTCAA
GAGATGCAAC GCTTTGTGCG CGATGGCATC ACATCCGTCG AGTTGTCGGA AGCCGTCAGC
GGGCTGCTGC AACAGGGCCT GATCAGTCGC ACAAGGGATG GCCTTCTGGC TGGGGCGCTG
GCGAATCAGC TTTACCTTGG ACGCACCATG GCCCATACGG CCGAAGTGGA GGCTCGCATC
AGCAAGGCCA CGCCGGAGGC GGTCAATGAC GCGATCCGGC GTTACCTGAG TCCGGATACG
TTGACGCAGG CATTTGCCGG AGACTTCGGC TCGGGTGCAG GCACCCCGGC AGCAACGGCG
GCGGAACCCG CCACCGCGCC GGCAGCCGCC CCAGCGGAAC CGGCCAGACC ATGA
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| Protein sequence | MRRLVTSFAA SFVTGAACFI LAGLSALPVP AFAARPSSVA PPPPAAPVIR AERVAAVEGI
TEYRLPNGLR ILLAPDDAQP TTTVNMTYLV GSRHENYGET GMAHLLEHLM FKGTPSLPGR
TIPTEFARRG MQFNGTTAQD RTNYFETFAA SDDNLDWALR MEADRMVNSF ISRADLDKEM
TVVRNEMEIG ENNPMRMLQQ QMYAAAYRWH NYAKAPIGAR SDVERVGIQN LQAFYRRYYQ
PDNAVLVVAG QFDPVRALSR IEQAFGPIPR PTRVLPTEHT VEPPQEGARE LTLTRPGDSS
IVAAMYHVAP GAHPDTTALA LLTVILADTP GGRLEHALVD TRKAAWQMSM FDAMKDPGVI
LFAAGTGKDR PIEPVRAALL AEIEGLAAKP VTQDELDRAR VRMRNAYEKI LNDPARYGVA
LSESIAKGDW RLLFIARDRV ETTTLEDVQR VAENYLRQTN RTVGEFLPGD KPQLATIPQS
PDVAALVRDY AGKAVAQAVP TFDPSPANID AHTVRQTLPN GMELALLSKP TRGEAVNGTL
VLHLGNTQSL QGKTAIGSLT AGMLDRGAGV FSRQQIADRF EALKANVSIS GSSERLTVRF
ETHRAYLPDL LDLLRTVLRM PTFPSAELET LRASSIAGVD SQRRQPNALA PNALGRHGNP
YPAEDPRYTP TFDESVASLR GVTQADLREF HAQFYGADHA QLAIVGDFDA ADAAKQIQFL
FGDWRAQVPF ERVDRPFIAI PAASFTLDTP GKANAVYLAS QPVDLLNDSP DYPLMLIAAR
VLGGTGMRSR LADRLRQQEG ISYGVSSSLS IGALDRAGRF ALWAVYAPQN QTRLRDAVGQ
EMQRFVRDGI TSVELSEAVS GLLQQGLISR TRDGLLAGAL ANQLYLGRTM AHTAEVEARI
SKATPEAVND AIRRYLSPDT LTQAFAGDFG SGAGTPAATA AEPATAPAAA PAEPARP
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