Gene Rmet_5903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5903 
SymboleutC 
ID4042767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp103787 
End bp104557 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID637981322 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_588031 
Protein GI94314822 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.542199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGC CAGCGAACCC CGAAGACCCG TGGGCGCGCT TGCGCCAGTT CACACGCGCC 
CGCATCGCCA TCGGCCGCAC CGGTCACGCG CAGAAGACCG CGTCGATCCT GGCGTTTGGC
CTGGCCCATG CACAGGCGCG TGATGCCGTG CATCTGGCGC TCGATGTGGC GGCGTTGGAA
ACCGCGCTGC GCGATGCCGG CCTGGATGCG CTGCACGTGC TGCACGCGCA TGGCGCAGCG
GCGGATCGCG ACCAGTACCT GCGTCGCCCT GACCTGGGCC GAAGTCTCGA TGCCGAGAGC
CGCGCGCGAC TCGTTCCATC GGCGCAGCCA TACGATGTCG TCTTCGTGAT CGCCGACGGG
CTTTCCGCAC TGGCCGCGCA GCGCCACGCG GTGCCGCTGC TGCAGGCCGT GCTGGCGCGT
CTGCATGACT GGCGGGTTGG ACCGGTGGTG GTCGCGCGGC AATCGCGGGT GGCGTTGGGC
GACGAGATTG GCGAGCGCCT TGGTGCGCGG CAGGTGGTGA TGCTGATTGG CGAGCGTCCG
GGGCTCAGTT CGCCGGATAG CCTTGGGATC TACCTGACAT TCGACCCCCG TGTGGGGCGC
ACGGATGCCC AGCGCAACTG CATCTCCAAC GTGCGGCCCG AAGGACTGTC TTATGCGCAG
GCGGCGGACA GGCTGGTGTT CCTGATGCAA GGGGCGGTCG CGCTCGGTCG GTCCGGCGTG
GACCTGAAAG ACGACAGCGC CGCCGTGTCG GCGGCACTGT CGCCCCCCTG A
 
Protein sequence
MSTPANPEDP WARLRQFTRA RIAIGRTGHA QKTASILAFG LAHAQARDAV HLALDVAALE 
TALRDAGLDA LHVLHAHGAA ADRDQYLRRP DLGRSLDAES RARLVPSAQP YDVVFVIADG
LSALAAQRHA VPLLQAVLAR LHDWRVGPVV VARQSRVALG DEIGERLGAR QVVMLIGERP
GLSSPDSLGI YLTFDPRVGR TDAQRNCISN VRPEGLSYAQ AADRLVFLMQ GAVALGRSGV
DLKDDSAAVS AALSPP