Gene Rmet_5902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5902 
SymboleutB 
ID4042766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp102387 
End bp103769 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content67% 
IMG OID637981321 
Productethanolamine ammonia-lyase large subunit 
Protein accessionYP_588030 
Protein GI94314821 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.40775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA CGCATACCGT CGGCGTACGC CGACACGTCT TTGACGATCT GCGCACGCTG 
CTGGCCAAGG CCAGTCCGGC CCGGTCGGGC GACGCCCTCG CGGGTATCGC CGCCGCCAGC
GAAGAAGAGC GGATGGCGGC GCGTATGGCG CTGGCGGACA TGCCGCTGGC GCATTGCCTT
GCGGAGCCGC TGGTTCCTTA CGAGGCCGAC GAGGTCACCC GGCTGATCGT GGACAGCCAC
GACGCGCAGG CGTTCGCGGC GCTTGCCAGC CTGACCGTCG GGGAGTTCCG GGACTGGCTG
CTGCGGCACG ACACCGATAC GGCCACGCTG GCGCGGGTGG CGCCAGGCGT CACCCCCGAG
ATGGCGGCGG CCGTGAGCAA GCTCATGCGC AACCAGGACC TGGTGGCCGT GGCGCGCAAA
TGCGCGGTGG TCACCGCCTT CCGCAACACC ATCGGGCTGC CCGGGCGCCT ATCCGTGCGG
CTGCAGCCGA ACCATCCGAC CGACGACCCG CGCGGCATCG CCGCATCGAT CATCGACGGG
CTGCTGTTCG GCTGCGGCGA TGCCACCATC GGCATCAACC CGGCCAGCGA CAACCTTGGG
GCGATCACCA CGTTGCTGAA GCTTCTGGAT GACATTCGCA TCCGCTACGA GATACCCACC
CAGTCTTGCG TGCTGACTCA CGTCACCAAC ACCTTGCGCG TGATGGAGCT GGGCGCGCCG
GTCGATTTGG TGTTCCAGTC GGTGGCTGGC AGCCAGGCGG CCAATGCAGC GTTCGGCATC
TCTCTGGCGC TGCTCGAAGA GGCACGGCAG GCGGCGTTGT CGCTGCGGCG CGGCACGGTG
GGGCACAACG TGATGTATTT CGAGACCGGC CAGGGCAGCG CGCTTTCCGC CAACGCCCAC
CATGGTGTGG ATCAGCAGAC CATGGAGGCG CGCGCGTATG CGGTGGCGCG CCGGTTCGAG
CCGTTGCTGG TCAATACCGT GGTGGGGTTC ATCGGTCCCG AGTATCTCTA CGACGGCAAG
CAGATCATCC GGGCCGGGCT TGAGGACCAC TTCTGCGGCA AGCTGCTGGG CGTGCCGATG
GGCTGCGACG TCTGTTACAC GAACCACGCC GAGGCCGATC AGGACGACAT GGACAACCTG
CTGACGCTGT TTGGCGTGGC GGGCATCAAC TTCATCATGG GCGTGCCCGG CGCCGACGAC
ATCATGCTGA ACTACCAGAG CACGTCGTTT CATGACGCGC TGTACCTGCG CGAAGTCCTT
GGCCTGCGGC CCGCGCCGGA GTTCGAGGCG TGGCTGCGCA AGATGGGCAT TGTCGACGCG
GGCGGGCGGT TGCTGGAGCC TGGCACGCGC CAGGCGCTGC TGACCATGGC GGACACGCTT
TGA
 
Protein sequence
MAFTHTVGVR RHVFDDLRTL LAKASPARSG DALAGIAAAS EEERMAARMA LADMPLAHCL 
AEPLVPYEAD EVTRLIVDSH DAQAFAALAS LTVGEFRDWL LRHDTDTATL ARVAPGVTPE
MAAAVSKLMR NQDLVAVARK CAVVTAFRNT IGLPGRLSVR LQPNHPTDDP RGIAASIIDG
LLFGCGDATI GINPASDNLG AITTLLKLLD DIRIRYEIPT QSCVLTHVTN TLRVMELGAP
VDLVFQSVAG SQAANAAFGI SLALLEEARQ AALSLRRGTV GHNVMYFETG QGSALSANAH
HGVDQQTMEA RAYAVARRFE PLLVNTVVGF IGPEYLYDGK QIIRAGLEDH FCGKLLGVPM
GCDVCYTNHA EADQDDMDNL LTLFGVAGIN FIMGVPGADD IMLNYQSTSF HDALYLREVL
GLRPAPEFEA WLRKMGIVDA GGRLLEPGTR QALLTMADTL