| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5895 |
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| Symbol | |
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| ID | 4042759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 94275 |
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| End bp | 95414 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981314 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_588023 |
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| Protein GI | 94314814 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAC TCACACCCGG CGCGCTGGCA GGCATTCGCG TAGTCGATCT GTCGCGCATT
CTGGGCGGCC CGCTTTGCGG CCAGATCCTC GGCGATCACG GCGCGGACGT ACTCAAGATC
GAGCCTCCGC AGGGCGATGA CACACGCACC TGGGGGCCGC CGTTCCGCGA TGGCGTGGCG
TCGTACTACT TCGGCCTCAA TCGCAACAAG CGCATCATGA AGCTGGACCT GACGGCCGAC
ACCGACCGCG AAGTCTTGCT GACGCTGCTG GCCGATGCCG ACGTGCTGAT CGAGAACTTC
AAGACCGGCA CGCTCGAGAA ATGGGGCCTT GGTTTCGATG TGCTGTCGCA GCGCTTCCCC
CGGCTCGTGC ATTGCCGCGT GTCGGGCTTC GGCGCCGATG GTCCGCTGGG TGGACTGCCG
GGTTATGACG CGGCGATCCA GGCGATGGCC GGCATCATGA GCATCAACGG CGAGGCCGAC
CGAGAACCGC TGCGCGTTGG TTTGCCCGTG GTGGACATGG TCACTGGTCT GAACGCCGCG
CTGGGCGTGC TGCTGGCATT GCAGGAGCGC GAACGCAGCG GCCGTGGGCA GTTCGTGGAA
TCGGCGCTAT ATGACTCGGG CCTGTCGCTG CTGCATCCCC ATGCGGCCAA CTGGTTCATG
AGTGGCAAGA CGCCCGGGCG CACCGGTAAC GCGCATCCGA ACATCTACCC GTACGACACG
GTGGCCACCG CGACCGATCC GATCTTCCTT GCCGTCGGTA ACGACCGGCA ATTCCGCATC
CTGTGCGAGT ACCTCGGCGT GGCGGAGCTG GCCGACGACG AACGCTTTGC AACGGCAGGC
GCGCGCTCGG TCAATCGGGC GCAATTGAAG GGCACGCTGG AATCGAAGCT GGCCACGTGG
GACGGCAAGG CGCTGGCCGA CGAACTGTCT GCGGCCGGTG TACCGTGCGC ACCGGTGTTG
TCGGTGCCCG ATGCACTGAC GCATCCGCAT ACCGCCCATC GCGAGATGGT GGTGGAGATG
CCCGGCGGTT ACAAGGGCCT GGGCGCTCCG GTCAAACTGA GCCGCACGCC GGCGACGTAC
CGGTATGCAC CGCTGACCGA AGGCAACCAG TTCCTGCCGC GCGAGGCGGC GAACGATTGA
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| Protein sequence | MTPLTPGALA GIRVVDLSRI LGGPLCGQIL GDHGADVLKI EPPQGDDTRT WGPPFRDGVA
SYYFGLNRNK RIMKLDLTAD TDREVLLTLL ADADVLIENF KTGTLEKWGL GFDVLSQRFP
RLVHCRVSGF GADGPLGGLP GYDAAIQAMA GIMSINGEAD REPLRVGLPV VDMVTGLNAA
LGVLLALQER ERSGRGQFVE SALYDSGLSL LHPHAANWFM SGKTPGRTGN AHPNIYPYDT
VATATDPIFL AVGNDRQFRI LCEYLGVAEL ADDERFATAG ARSVNRAQLK GTLESKLATW
DGKALADELS AAGVPCAPVL SVPDALTHPH TAHREMVVEM PGGYKGLGAP VKLSRTPATY
RYAPLTEGNQ FLPREAAND
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