Gene Rmet_5880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5880 
Symbol 
ID4042744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp76579 
End bp77979 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content68% 
IMG OID637981299 
Producthypothetical protein 
Protein accessionYP_588008 
Protein GI94314799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGC CGTCCTTTTC TTCGAGTTTC GGAAACGCCA TGACTGTCCC CTTGCTGATC 
GGCTCCGGCG CCGGATTTTC CGGTGACCGC ACCGACGCCG CCCTGCCAGT GGTGCGCACG
CTGATTGCCG CGGGCGGACC TGCCGCGCTG ATCTTCGAAA CGCTGGCCGA ACGCACGTTG
GCACTTGCGC AACTGGCACG TCGCGACGAT CCCGAGCATG GCTACGAACC TCTGCTGGAC
CAGCTCCTGA CGCCGGTCCT CGGTTTGTGC CTGGTCAACG ACATTCCGAT CGTCGGCAAC
TTCGGCGCGG CCAATCCGCG TGCGGCGGCC CGCCGTATCG GCGAGCTGGC GGTGGAGTTG
GGTCTGCCGG TGCCGCGTGT GGCCGTCGTG GAGGGTGATG ACCTGTCGCA CGACGAAGGT
CGGGCGCTGC TGCGCGGTAT CGTCGGCGAC ACTTTCCCGG AGGCGCGTTT CGTCTGCGCC
AACGCCTACA TCGGCGCGCA GGGCATTGCT GATGCGCTGC GCGACGGCGC GCAGGTGGTG
GTGTGCGGCC GCGTGGCCGA TCCCGCGCTG GCCGTGGGTC CGGCGATGGC GCACTTCGGC
TGGGCCTGGG ATGACTGGAA TCGCCTGGCT GCTGCGACGA TGGCCGGCCA TCTGCTCGAA
TGCGGCGCGC AGGTCAGCGG CGGCTATTTT GCCGATCCGG GCATGAAGGA CGTGCCCGAT
GTACACGCCG TCGGTTTTCC GATCGCACGG CTCGATGCCG ATGGTGGCAT CGAGATCTTC
AAGGCGGCTG GCACCGGCGG CTGCGTGGAC CTGCGCACCG TGAAGGAACA ACTTCTGTAC
GAGGTGCACG ACCCCTGCGC CTACCTGACC CCCGACGTGG TCGCCGATAT CGGCGAGGTG
ACGGTCGCGC AGGTCGGTCC GGATCGCGTA GCTGTCCGCA ATATCCGAGG CCATGCGCGT
CCGGACACGC TCAAGGTCAA CCTGTTCTAC CAGGGCGGGT GGATTGCCGA GGGCGAGATC
TCGTATGCAG GCCCCAATGC GGCGGCGCGT GCGCGACTGG CTGCCGACAT CCTTGGCAAA
CGCATGAAGG GGCTCGGTTT CGACGTGCCA ATCCGCTTCG ACCTGATCGG CGTCCTGAGC
GTGTTTGCCG ATGACGCCGG CGAGATGCTG GCGCGGCCGC AGCCGCATGA GGCCGAGGCG
CGCGATGTGC GCCTGCGCGC GGCGCTGGCG CACGAGGACA AGGCGGTGGC CCAGGCGCTG
CTGCGCGAGG TCAATGCGCT CTACACATGC GGCCCCGCGG GCGGTGGTGG CGTGCGCACG
GCATTGCGTG CGCGCCTTAA CGCGATGTCG TGTCTGGCGC CACGCTCCGC CGTGGCGCCG
CGCCATACCC TGTTGTCCTG A
 
Protein sequence
MGSPSFSSSF GNAMTVPLLI GSGAGFSGDR TDAALPVVRT LIAAGGPAAL IFETLAERTL 
ALAQLARRDD PEHGYEPLLD QLLTPVLGLC LVNDIPIVGN FGAANPRAAA RRIGELAVEL
GLPVPRVAVV EGDDLSHDEG RALLRGIVGD TFPEARFVCA NAYIGAQGIA DALRDGAQVV
VCGRVADPAL AVGPAMAHFG WAWDDWNRLA AATMAGHLLE CGAQVSGGYF ADPGMKDVPD
VHAVGFPIAR LDADGGIEIF KAAGTGGCVD LRTVKEQLLY EVHDPCAYLT PDVVADIGEV
TVAQVGPDRV AVRNIRGHAR PDTLKVNLFY QGGWIAEGEI SYAGPNAAAR ARLAADILGK
RMKGLGFDVP IRFDLIGVLS VFADDAGEML ARPQPHEAEA RDVRLRAALA HEDKAVAQAL
LREVNALYTC GPAGGGGVRT ALRARLNAMS CLAPRSAVAP RHTLLS