| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5878 |
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| Symbol | |
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| ID | 4042742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 74793 |
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| End bp | 75572 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637981297 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_588006 |
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| Protein GI | 94314797 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.854497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATG CATCCACAGC CCATCCCTTC TCGCTCACCG GCCGCGTGGC ACTGGTCACG
GGCGGTGCGC AGGGCCTTGG CCAGGCGATT GCCGCCGGCC TGGCCGCCGC TGGCGCGCAC
GTCCTGATCT GCGCGCGCAA CGCCGCGCGC GTGGACGAAG CCGTCGCGCA ACTGCGGGCC
AACGGCCTAG GCGCCGAGGC GCTCGTTCTC GACATCACCG ATGAAGCCGC CGTGGCCGCG
GCGTTCGACG ACATCGTCGC CTGTCACGGG CGGCTCGACA TCCTCGTCAA TAATGCCGGC
GCGCGTAATC GCAATTCGAT GGCCCACCTC GATGCGGCCG ACCTGCGGCA GATGCTGGAG
ACCAACCTCG TCGCGCCCTA TGCGTTGTGC CGTCATGCGG CGCAATGGAT GCAGCGTGGC
GGGTATGGAC GGATCGTCAA TGTCACGTCG ATCGCTGGCC AGGTGGCGCG CGCCAATGAC
GTGCTCTATC CCGCCACCAA GGGCGGACTC GATGCGCTGA CGCGTGCGAT GGCCGCTGAT
CTGGGCCGCC AGGGCATTAC CGTCAACGCC ATTGCGCCGG GATACTTCGC TACCGAGCCA
AATCAGACGA TGGTGGCCGA CAAGACCGTG GCAGAGTGGC TGCGCAACCG GACCTCACTG
GGCCGCTGGG GCCAACCGGA AGAGGTGGCG GGCGCGGTGG TGTTCCTGGC TTCGCCGGCG
GCATCGTACG TGACAGGGCA GGTGCTGGCC GTCGATGGCG GCTACCTCGG CCACTTCTGA
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| Protein sequence | MENASTAHPF SLTGRVALVT GGAQGLGQAI AAGLAAAGAH VLICARNAAR VDEAVAQLRA
NGLGAEALVL DITDEAAVAA AFDDIVACHG RLDILVNNAG ARNRNSMAHL DAADLRQMLE
TNLVAPYALC RHAAQWMQRG GYGRIVNVTS IAGQVARAND VLYPATKGGL DALTRAMAAD
LGRQGITVNA IAPGYFATEP NQTMVADKTV AEWLRNRTSL GRWGQPEEVA GAVVFLASPA
ASYVTGQVLA VDGGYLGHF
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