| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5869 |
|---|
| Symbol | |
|---|
| ID | 4042733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 64471 |
|---|
| End bp | 65511 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637981288 |
|---|
| Product | extra-cytoplasmic solute receptor |
|---|
| Protein accession | YP_587997 |
|---|
| Protein GI | 94314788 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCG TTCGCCCGGG CGAGCATCAG CCTGCCTGCA AGTCTGCCCT GCAATCCGCC
AGCAGCCAGC GGCGCGCATC CTGTGCAGCG CTGCTCGCGC TGGCCGCGTG GTGCATCGCG
CCTTCCGCAC AGGCCGCGCA AGCTGCGATC GCTGGCGGCA AGCCTATCCG CATCCTCGTA
GGCGCGCCCG CGGGCGGTAC CACCGACACG CTGGCACGCA CGATCGCCCA AGAAATGTCG
CAGACGCTGG ACCAGCCCGT GGTGGTCGAG AACCGCCCCG GCGCAGGCGG CAATATCGCT
GCCGACATGG TGGCCAAGAG CCCGGCCGAC GGCACTACGC TGCTGATGAG CTTCACCAGC
CATACGATCA ACGCGACGCT GTACAAGAAG CTGCCGTTCG ATCCGATCCA GGACTTCACG
CCGATCACGC TCGTGGCCAC CGTGCCCAGC GTGCTGGTGG CACGGCCCAA CCTGCCCGCC
AACAACATCC CCGAACTGAT CCGTCTGGCC AAGTCCGAGC CGGGCAAGCT GAACTTCGGC
ATCGGCGCGG TGGGATCGTC GGTGCATCTG GCCGGTGACA TGTTCAAGAT GATGACGGGC
ACGTATATCG TCAACATCCC GTACAAGGGC ACCACGCCCG CCATCACGGA TCTGCTCGCG
GGGCAGGTTG ACCTGATGTT CGCCAGCACG ATCAACGTGG CGCAGCACGT CAAGGCCGGC
AAGCTCAAGG TGCTCGGCGT GACCAGCCCG ACGCCGCTGC CGCAGTTTCC GGGTGCGCAG
CCGATTGGCG CCACCGTGAA GGGTTTCGAG TCCAGCGCGT GGTTCGGCCT GTTCGGCCCG
GCCAATCTGC CGCCGGAGAT CACACAGGCA CTGTATCAGG CCGCACGCCA CGGGCTCGAG
CAGCCCGCAG TGCGCAAGCG CCTGGAAACC GATGGCGCGC AGCCCAGTGC CATGCCGCCG
GAGGCGTTCG CGAATTTCGT GAAGCAGGAC GTCAAGCGCT GGGCCACGGT GGTGAAGTAT
TCAGGAGCCA AGCCCGAATG A
|
|---|
| Protein sequence | MPVVRPGEHQ PACKSALQSA SSQRRASCAA LLALAAWCIA PSAQAAQAAI AGGKPIRILV
GAPAGGTTDT LARTIAQEMS QTLDQPVVVE NRPGAGGNIA ADMVAKSPAD GTTLLMSFTS
HTINATLYKK LPFDPIQDFT PITLVATVPS VLVARPNLPA NNIPELIRLA KSEPGKLNFG
IGAVGSSVHL AGDMFKMMTG TYIVNIPYKG TTPAITDLLA GQVDLMFAST INVAQHVKAG
KLKVLGVTSP TPLPQFPGAQ PIGATVKGFE SSAWFGLFGP ANLPPEITQA LYQAARHGLE
QPAVRKRLET DGAQPSAMPP EAFANFVKQD VKRWATVVKY SGAKPE
|
|---|
| |