| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5860 |
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| Symbol | gmd |
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| ID | 4042724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 56442 |
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| End bp | 57647 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637981279 |
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| Product | GDP-D-mannose dehydratase, NAD(P)-binding |
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| Protein accession | YP_587988 |
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| Protein GI | 94314779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTAA ACGAACTGGA TAACCTCTTC GACGCGGCCG ACAAGCCCGG CGATGCATCG
ACGCCACGCG GCGCCAATGG CCGGCGCCGG GCACTGATCA CCGGCATCAC CGGCCAGGAC
GGTTCGTACC TGTGCGAATA CCTGCTCGAC AAGGGATACG AAGTCCACGG CATCAAGCGG
CGCAGTTCGC TGTTCAATAC CGAGCGTATC GATCATCTGT ACGAGGACCC GCAAGCACCG
GACCGCAGGT TGATCCTCCA TCACGGCGAC ATGACCGATA CGGCGAGCCT CGTGCGCGTC
GTGCAACAGT CCCGCCCCGA CGAGGTCTAC AACCTCGCGG CGCAGAGCCA CGTGCAGGTG
TCCTTCGAGG AGCCCGAGTA CACCGCCAAC ACCGACGCCG TCGGCACGCT GCGCCTGCTC
GAGGCGATGC GGATTCTCGG CATGGAGCAA AGCACGCGTT TCTACCAGGC ATCCACGTCC
GAACTGTATG GACTGGTGCA GGAGATTCCG CAGAAGGAAA CCACGCCGTT CTATCCGCGC
AGCCCGTATG CCGTGGCCAA GCTCTACGCC TACTGGATCA CCGTGAACTA CCGTGAAGCC
TATGGCATGT ACGCGTGCAA CGGCATCCTG TTCAATCACG AAAGCCCCGT GCGCGGCGAG
ACGTTCGTCA CCCGCAAGAT CACACGCGCC ATCGCGCGCA TCGCGCTGGG CCTGCAGGAA
GTGCTCTATC TTGGCAACCT GTCCGCGCTG CGCGACTGGG GCCATGCGCG CGACTACGTC
GAGATGCAGT GGCTGATGCT GCAGCAGGAA ACGCCGCGTG ATTTCGTCAT CGCCACGGGC
GAGCAACACA GCGTGCGCGA GTTCGTCACG CTCTCCGCGC AGAAGCTCGG GCTAACGGTC
ACCTTCGAGG GCAGCGGCGT CGACGAGGTC GGCATCATTT CTCATATCGA CACCTCACGC
CGCGAGTTGT CCTCCCGCTG CAAGGTCGGC GACGTGATCG TGCGCGTGGA CCCGCGCTAC
TTCCGCCCGA CCGAAGTCGA GACGCTGCTG GGCGACCCGA CGCAGGCACG TGAGCAACTG
GGCTGGTCCC CACGCATCAC GTTCGACGAA CTAGTGCACG AAATGATCGA AGCGGACTTC
GTGGCCGCGC GGCGTGACGC GCTGGTCAAG ATGGCCGGCT TCAGAACCTA TGACTACCAT
GAGTGA
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| Protein sequence | MGVNELDNLF DAADKPGDAS TPRGANGRRR ALITGITGQD GSYLCEYLLD KGYEVHGIKR
RSSLFNTERI DHLYEDPQAP DRRLILHHGD MTDTASLVRV VQQSRPDEVY NLAAQSHVQV
SFEEPEYTAN TDAVGTLRLL EAMRILGMEQ STRFYQASTS ELYGLVQEIP QKETTPFYPR
SPYAVAKLYA YWITVNYREA YGMYACNGIL FNHESPVRGE TFVTRKITRA IARIALGLQE
VLYLGNLSAL RDWGHARDYV EMQWLMLQQE TPRDFVIATG EQHSVREFVT LSAQKLGLTV
TFEGSGVDEV GIISHIDTSR RELSSRCKVG DVIVRVDPRY FRPTEVETLL GDPTQAREQL
GWSPRITFDE LVHEMIEADF VAARRDALVK MAGFRTYDYH E
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