Gene Rmet_5859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5859 
SymbolwcaG 
ID4042723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp55457 
End bp56458 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID637981278 
Productbifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/GDP-4-dehydro-6-L-deoxygalactose reductase 
Protein accessionYP_587987 
Protein GI94314778 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA TGAGTGACGC ACGCCCGAGA GTGTTCGTGG CCGGCCATCG CGGCATGGTC 
GGTTCCGCGA TCGTGCGCGC GCTGGCCGCG CGTGGCGACG TGGAACTGGT CCTGCGCACC
CACCGCGAAC TGGATCTGAC CGAACAGCGG GACGTGCGCC ATTTCTTCGC CACCGAACGG
ATCTCCCAGG TCTACCTGGC GGCCGCGCGC GTGGGCGGCA TCCATGCCAA TAACGTCTAT
CCCGCCGAGT TCATCCAGCA GAACCTGACG ATCGCGGCCA ACGTGATTCA CGAAGCCTGG
CGCGGCGGTG TCGAGCAGTT GCTGTTCCTG GGTTCGAGTT GCATCTATCC GAAGTTCGCG
TCGCAGCCCA TCCAGGAATC GGCGTTGCTG ACCGGCGCGC TCGAGCCCAC CAACGCGCCA
TACGCGATCG CCAAGATCGC CGGCATGATG ATGTGCGACA GCTACAACCG CCAATACGGC
GTCGACTACC GGAGCGTGAT GCCCACGAAC CTCTATGGTC CGGGCGACAA CTACCATCCC
GAGAACAGCC ACGTCATCCC GGCATTGATC CGACGCATCC ACGAGGCCAG GCTGGCGGAT
GCGCCGGAGG TCGCCGTGTG GGGCTCCGGT GCGCCGATGC GCGAATTCCT TCACGCCGAC
GACCTCGCCC ACGCCTGCCT GCATGTGATG GACCTGCCCC AGGCATCGTA CCGGGCGCAT
ACGCAGGGCG CCGGATTCCT GAACGTCGGG AGCGGCGAAG AAGTCTCGAT TCGACAGCTG
GCGCTGCTGA TCGCGCGCGT GGTCGGCTAT CGCGGCAACA TCGCGTTCGA CCCGACGCGC
CCAGACGGCA CGCCACGCAA GATGCTCGAC TGCGGCCTTA TCAACGCAAC CGGCTGGCAG
CCGCAGGTGT CGCTGGAATC CGGCCTGCGA TCGACCTACC AGGAGGCGCT TTCGAGCGGA
CGGCTCAGCG TCGAGCCGGA AGCGCTGGCC ACGCCAACCT AG
 
Protein sequence
MTTMSDARPR VFVAGHRGMV GSAIVRALAA RGDVELVLRT HRELDLTEQR DVRHFFATER 
ISQVYLAAAR VGGIHANNVY PAEFIQQNLT IAANVIHEAW RGGVEQLLFL GSSCIYPKFA
SQPIQESALL TGALEPTNAP YAIAKIAGMM MCDSYNRQYG VDYRSVMPTN LYGPGDNYHP
ENSHVIPALI RRIHEARLAD APEVAVWGSG APMREFLHAD DLAHACLHVM DLPQASYRAH
TQGAGFLNVG SGEEVSIRQL ALLIARVVGY RGNIAFDPTR PDGTPRKMLD CGLINATGWQ
PQVSLESGLR STYQEALSSG RLSVEPEALA TPT