Gene Rmet_5852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5852 
Symbol 
ID4042716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp46881 
End bp47642 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID637981271 
Producthypothetical protein 
Protein accessionYP_587980 
Protein GI94314771 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.143064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.707413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCG TGATCATCAA CGCCGACGAT TTCGGCTATG ACGACGATAC GTTTCAGGCC 
ACCGTTGCCT GCTTCGACGC TGGGCTGCTG ACCAGCGCGA CGATCCTGGC GGGCAGCCCG
GCGACAGCAC ACGCGTGCCA GTACGCGCGA GACAATCACA GCCGGTTCTC GTTCGGGCTG
CACTTCAATA TCGTGGAAGG GCGGCGCCCG CATGGCGCGT CCTCCACGCT GTGCCGCAAG
GACGGCTCGC TGTTCCCGCC GAAGATCCAG CGCGCCCGCG CGATGGCGGG CCTGATCGAT
GCCGCCGATA TCCGGCGCGA GTTCCGGCTC CAGCTTGACG AGCTGCGCGA TCACGGCGTG
AACGTGTCGC ACGTCGATGG GCATGGCCAT CTGCACAAGT ACCCCGCCGT CATGCGGGTG
CTGCGCGACG AAATGCTGCG CGCCGGCATC GAGCGTGTCC GGCCGCCGCA GAACTGCTAC
TTCCTGAAGA ACCACATGCG CGGCGCGATG AACGTGATGC TGCTGCGCCA CTTCAACGGC
CTGCGCAGCC CGGACTTCTA CGTGGGCGCG GATACGCGTC AGCAGGGATG GGCGCTGCGG
TTGCCGGCGA TGCTGCCGGA AGGCGTGACC GAGATGTCGG TGCACCCGGG ATTCGCCGAG
CCATGGCGCC GGGAGGAGGG CGAGCCGCTG ATGCATCCGA CGCCCCTTGC CACCGCGTTC
AGGCAGGCCG GGGTCGTGTT GATGCGCTAT CACGACATCT GA
 
Protein sequence
MKGVIINADD FGYDDDTFQA TVACFDAGLL TSATILAGSP ATAHACQYAR DNHSRFSFGL 
HFNIVEGRRP HGASSTLCRK DGSLFPPKIQ RARAMAGLID AADIRREFRL QLDELRDHGV
NVSHVDGHGH LHKYPAVMRV LRDEMLRAGI ERVRPPQNCY FLKNHMRGAM NVMLLRHFNG
LRSPDFYVGA DTRQQGWALR LPAMLPEGVT EMSVHPGFAE PWRREEGEPL MHPTPLATAF
RQAGVVLMRY HDI