Gene Rmet_5850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5850 
SymbolepsP 
ID4042714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp44957 
End bp45451 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID637981269 
Productprotein tyrosine phosphatase 
Protein accessionYP_587978 
Protein GI94314769 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA TGAGAGAGGG AAAGGAAGCC GCATTCATCC GGTCGATCCT CGTGGTGTGT 
ATCGGCAACC GGTGCCGCAG CCCGATGGCG GCGGCACTGC TTGGCCGCGC GCTGCCGCAG
TGCCGCGTGC TGTCGGCGGG CCTGGCACCC CCGGTAGGCG CCGCGGCCGA TCCGCGCGCG
GTGCGCCTGC TGGCGGTGGA GGGCAGCGAT CTGACCGACC ACCGCGCGCG CGCCGTGAGC
GCCGCGCTCG TCGCCGGCGC GGACCTCGTG CTGGTCATGG ATGAAGAGCA ACGCGACGCG
CTGGAGGACA TGTACCCCCA GGCGCGCGGC AAGACCTATC GCCTGTGCGA ACAGGAACAA
ACCGACGTGC CAGATCCGTT CAGCGGATCG ATGAGCATGT TCGTCATCGC GCTTGGGCTG
ATCAAGATGG GGGTTGAATC CTGGTCGGCA AGAATTCATG CGGCAGAACC GGCACACCGC
CACGGAGGGG CATGA
 
Protein sequence
MEVMREGKEA AFIRSILVVC IGNRCRSPMA AALLGRALPQ CRVLSAGLAP PVGAAADPRA 
VRLLAVEGSD LTDHRARAVS AALVAGADLV LVMDEEQRDA LEDMYPQARG KTYRLCEQEQ
TDVPDPFSGS MSMFVIALGL IKMGVESWSA RIHAAEPAHR HGGA