Gene Rmet_5848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5848 
Symbol 
ID4042712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp41436 
End bp42629 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID637981267 
Producthypothetical protein 
Protein accessionYP_587976 
Protein GI94314767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGA AGCGCCCGGG CGTGCGCCGC CTGACGGTCT ACGCCGGGGT GGCACTCACG 
ATCCAGATTC TGGTCCTGGG GATATGGATC ATCCGGTTCT ACATTCTCGG GGACCAATCG
GCCCCCATGC TCGGCATCGA CTTCGCGATC TTCTGGTCCG CCGCAAAGGT TGCCGTGGAA
CATGGGGCGG CCTCGGTATT CTCGCCGGAG TGGATGCTGC CCATGGAACG CGCCTTGGGG
CTCAGCGACT ATTCGGCATG GCCGTATCCG CCCACGTTCC TGCTGGTGGT CTTGCCGTTG
GGGCAACTGC CCTTTGGTGC GGCGCTGATC CTGTATTCAG TGCTCGGCCT GCTCGTCTAT
GGCGCCGTGC TGCTGCGCAT CTGTCGCGGT ATCGACCGTG GGTATCTGTC GCTGCTGCTG
GCGTTCCCGG GGGCTGCCAT TGCCATCGGG CTTGGTCAAA ACTCCCTGTT CACGCTCGCT
GCTGCCGGCG CGGCGCTGGC ACTGCTCGAA GTCGAGGCGG CGCTTGCGGG GGTATGCATC
GCCGTGCTGG CGATCAAGCC GCAATTCGGC ATCCTGTTTC CGCTGGCGCT CATCTGCGGC
AGGCATTGGA AGGTGTTTGG CGTCTCGGCG CTTTGCACTG CCGTTTTCGT TGGCGCCAGC
GTCGTGCTGC TCGGGCAGGA CGCATGGCGC GCGTTTGCAG CGTTCCTGCC GCAATTCGGC
ACGCTGGCGG TGGAGCAAGG CGGCAACATG ATGTGGCCGG GGATGCCAAC CGCTTTCGCG
CTGGGCCGTA GCATCGGCCT CTCTGTCAAC GGCGCCTACC TGTTGCACGG CCTCGTCGCA
GCACCGGCGG TTCTTGCGAT GGCGTTCCTC TGGGCGCAGC GCGCCAGATT CGAGCTACGG
GCGGCCTCGT TCATCCTTGC CACGTTGCTG CTGCAACCCT ACGTCATGTT CTACGACCTG
GCCTGGCTTA TCTTGCCGAT GGCCTTTCTT CTGCGCGATG GCAACAGGTT GCCGCTGTCG
CCCCTGGAAT GGATCGTCTT CGCCTTGGCC TGGGTGGCGC CGGCTCAGGC GCTGCTATCC
GCGTATCTGC ACCAGTATCT CAACGTGCTT CCCATCGTCA TGATCGCCTT GCTCGTCATG
CTGGTCCGGC GGCATCTGGC GATGACAGCG GTCGCGCCCG CTTATCAGCC ATGA
 
Protein sequence
MHEKRPGVRR LTVYAGVALT IQILVLGIWI IRFYILGDQS APMLGIDFAI FWSAAKVAVE 
HGAASVFSPE WMLPMERALG LSDYSAWPYP PTFLLVVLPL GQLPFGAALI LYSVLGLLVY
GAVLLRICRG IDRGYLSLLL AFPGAAIAIG LGQNSLFTLA AAGAALALLE VEAALAGVCI
AVLAIKPQFG ILFPLALICG RHWKVFGVSA LCTAVFVGAS VVLLGQDAWR AFAAFLPQFG
TLAVEQGGNM MWPGMPTAFA LGRSIGLSVN GAYLLHGLVA APAVLAMAFL WAQRARFELR
AASFILATLL LQPYVMFYDL AWLILPMAFL LRDGNRLPLS PLEWIVFALA WVAPAQALLS
AYLHQYLNVL PIVMIALLVM LVRRHLAMTA VAPAYQP