Gene Rmet_5844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5844 
SymbolepsB1 
ID4042708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp34430 
End bp36772 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content68% 
IMG OID637981263 
Productprotein-tyrosine kinase 
Protein accessionYP_587972 
Protein GI94314763 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCA TGTCATCTGC CGGCGCGATG CCGGCGCCAG GGAGCAGCGC CACGCGCAAG 
GGGGGGCGCC ATTTGCGCGC ATGGATGGAC CATGCTGGCT GGATTGTCGC GGCTGGCGTC
ATTGGTGCCA CGATTGCCGC GATGATCGGC ATTTCCCGTC CCAATCTCTA CGATGCCCAC
ACGCTCGTGC AGATCTATCA GAAGGGTGAC GGCTCGGGCA CCACGCAGCG CACCGAACCG
TTCGACGTGG GGATGCTGCG CAGCCGCGCC GTGGTCGGCC CGGTGGTGGA GCGCCTGCGC
CTGTACATCT CCGTCGAGCC GCTGCGCGCG CCATTGCTGG GCGGCGTGGC CGCGCACTTC
GCGCAGGCGG GCAAGCTCCG GGGACCGTGG CCGGAGCGGC TCGGTTACGC GTGGGGCGGC
GAGCGGGTCG ACATCCGCAC CCTGGACGTG CCGGAGCGCC TGCTCAACGT GCCAATGACG
CTCGAAGTGT TGCCTGGGGA TGCCTATCGC CTGACGCTCG ACGGCGAGCT CGTGACCGAT
GGCAAGATCG GCAGCCGTGT CGAAGAGAAT GGCGTGTCCA TCCTGGTGTC GCGCATCGAC
GCGCGCGCGG GCACGCGATT CACTGTCACA CGGCACGACA CGGCGCAGAC GATCGATACC
GTGGCGCGTG AACTGCGCAT CGGCAGCGAT GGCAGCGATA CCAGCACGGT ACGCATCGCG
TGGCAGAGCA GTGACCGCAC CGCGGTAGCC GCGCTGATCA ACGGCATCGC CGATTCCTAC
ATTACCGGAC AGGCCGAGAC GCGCCGCGAC GAGGCAGCCT CCACGCTGGC CTTCCTGAGC
GGCGAACTGC CGCGTGTCAA GGACGAGCTC GAACGCGCCG AGGCGGCGCT CACGCGCTAC
CGCTCGCGCA CGGGATCGAT GCAGCCGAGC CAGGACGCCC AGTCGTACCT GAACAGCAGC
ATCGATTACC AGAAGCAGAT CGCCCAGCTC AAGCTCGACC GCACCAAGCT GCTGCAGCGC
TTTACGGAAG AGTCGAACGA AGTACGAACG ATGGACAGCC AGATCCAGCA GCTCACGCGG
GACCGCAAGG AGCTGGATAC CCGGATGCAG ACGCTGTCGG TCTCCGAGCG CGAGTCCGTG
GCCCTGACGC GTGACGTCAA GGTGGCCGAG GACATGTACA TGTCCTTGCG CAACCGGCTC
GAACAGCTCT CGCTGGCCAA GCTCGACAGC ACCCGGCAGA CCCGCGTGGT CGACATCGCG
CTGACACCGG TCTCGCCAAT CGGCGTGGGC ACCGCGCCGC TCACGATGGG CGGCGGGTTG
CTGGGCATCT GCCTGGCGAT GTGCGTGGTC TCGGTGCGCC AGCGCATGAA GCCGGCCGTG
GCCACCGCCA ATGATGCCGA GGAGACGCTT GGCCTGGCCA TGCTCGGGGA TGTCGCGTAC
AGCCGCGAAC AGGTGGAACT GGAGCGGCTG CTGACGGCGA AGGACCAGGA TATCGGGACA
ATGCTGGCGC TGCAGGCGCC GGAGCCCGGG CGCCAGGTCG CGCAGGCGTT GCCGCATGGG
GCCGGCGATG CCGAGCCGGG TCATTGGGGT TTGCATGATC AATACCTGCT GGCCCGCAAC
GCGCCGCATT CGATGGCCGT GGAGGGCCTG CGCAGCGTGC GCGCGGCACT GCATTTCCTG
CGTCGCGAGG GCAGCAACAA GGTGGTGGCC GTGACCAGCC CCACCGCAGG GGCGGGCAAG
ACGTTTGTCT CGGTCAACCT GGCTGTGCTG TTCGCCGAAG CGGGCCAGCG CGTGTTGCTC
GTCGATGCCG ACCTGCGCCG AGGGCGGGTG TCGAGCTGGT TCGGCCAGCC GGCGGGTCCG
GGTATGGCCG AAGTGCTGGC CGGCCGCGCC ACGCTGGTCG ACGCGGCACG GCCAACCGTC
GTCAATGGGC TGTCGATCCT GCCTGCCGGC GCGCCGCCTA CGAACCCGTC GGAACTGCTT
ATGCGTCCTG CCTTTGCGGA TTGCCTGCGT GCTGGTGCGG AGCGCTTCGA CCTCGTCCTG
ATCGATACCC CGCCCGTTCT GGCGGTGGCG GATGCCATGC TCGTCGCCAA TGTCGTGGGC
GCGACGTTGC TCGTGCTGCG GGCCGATTCG ACGCTGCCGT CGCAGGTCGA GGAAACCATC
AAGCGCCTGA CCCGCGCCGG GGCCAGTCTC TCGGGCGGCA TTCTCAACGG CGTGATGCCG
AAGCGCAGCA ACCGCGTCGG CTTCGGCACC ATGAATCCCT ATCTCGGCAT GCCCACGGTC
ATGCCAGCGG TCCGGCAGAT TGCCCACGTC CCTGCCGTGG AAGACAAGAC AACAACGAGC
TGA
 
Protein sequence
MSTMSSAGAM PAPGSSATRK GGRHLRAWMD HAGWIVAAGV IGATIAAMIG ISRPNLYDAH 
TLVQIYQKGD GSGTTQRTEP FDVGMLRSRA VVGPVVERLR LYISVEPLRA PLLGGVAAHF
AQAGKLRGPW PERLGYAWGG ERVDIRTLDV PERLLNVPMT LEVLPGDAYR LTLDGELVTD
GKIGSRVEEN GVSILVSRID ARAGTRFTVT RHDTAQTIDT VARELRIGSD GSDTSTVRIA
WQSSDRTAVA ALINGIADSY ITGQAETRRD EAASTLAFLS GELPRVKDEL ERAEAALTRY
RSRTGSMQPS QDAQSYLNSS IDYQKQIAQL KLDRTKLLQR FTEESNEVRT MDSQIQQLTR
DRKELDTRMQ TLSVSERESV ALTRDVKVAE DMYMSLRNRL EQLSLAKLDS TRQTRVVDIA
LTPVSPIGVG TAPLTMGGGL LGICLAMCVV SVRQRMKPAV ATANDAEETL GLAMLGDVAY
SREQVELERL LTAKDQDIGT MLALQAPEPG RQVAQALPHG AGDAEPGHWG LHDQYLLARN
APHSMAVEGL RSVRAALHFL RREGSNKVVA VTSPTAGAGK TFVSVNLAVL FAEAGQRVLL
VDADLRRGRV SSWFGQPAGP GMAEVLAGRA TLVDAARPTV VNGLSILPAG APPTNPSELL
MRPAFADCLR AGAERFDLVL IDTPPVLAVA DAMLVANVVG ATLLVLRADS TLPSQVEETI
KRLTRAGASL SGGILNGVMP KRSNRVGFGT MNPYLGMPTV MPAVRQIAHV PAVEDKTTTS