| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5813 |
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| Symbol | |
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| ID | 4042677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2575065 |
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| End bp | 2576567 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637981232 |
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| Product | Fis family sigma54 specific transcriptional regulator |
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| Protein accession | YP_587941 |
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| Protein GI | 94314732 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCCCA CGTTGCGCGC GGCACCGACC GCGCAGCCAG CGGACCCCGA ACGGGCCATG
CGGCTCGCCG CCACACCTGC GGGCTTGGGT TCCGCCACTA ACAAGAAGTT CAACGTCCGG
GAGAACGTCA TGGACCGACT GTGCAAGGCG CCGACACGGA CCGCACAGAT CGTGCTCGTG
TCGCGCTATG AAGATTTTGG ATTTAACGCG AACCAGTTTG GCTCCGGATG GGAAATCCGC
CGGGTGCAGC AGGTTCGCGA CCTCGAGCGC CTGGTGCGTG CGAGTTCGCC CATGGCTGGC
GTGCTCGACC TGCAGACGCC TTACACCGAC GCCGAGCTGA GCCAGCTCGA ACAGGCGCTA
CAGCACCTGC ATGTGATGTG GGTCGCCATT ACATCCACGG CAATGCTGGA GGACGAGCGC
ATCCGTCGTC TGATCCGGGA CTATTGCGTC GACTACGTGC GCACGCCATT CTCGTTCGAC
GAGTTGCTTT ACACGCTCAA GCACGCGCAT GGCATGGCAT GTCTGCACGG GGCTCGCTCG
CCCGAACTGG TGGCGCGCGG GCCGATGATC GGAGAGTGCG CGCCCATGGG CAACATGTTC
CGCTCGCTGG CGAAGGTCGC GCACAACGAC GCGCCGGTGT TCATCTCCGG CGAATCGGGC
ACGGGCAAGG AACTCGCAGC CCAGGCCATC CACGAAGCGT CGAGCCGCCG CAAGGGGCCG
TTCGTGGCGA TCAACTGCGG CGCGATTCCA TCGCACCTCG TGCAATCGGA ACTGTTCGGC
TACGAGAAAG GCGCGTTCAC CGGCGCGAAC CAGCGCAAGA TCGGCTGGAT CGAGCAGGCC
CAGGGCGGCA CGCTGTTCCT CGACGAGATT GGTGACCTGC CGCTGGAAAG CCAGGTTGCC
CTGCTGCGAT TCCTGCAGCA AGGCATGATC ACGCGCCTAG GCGGGCACCA GTCGATTCCG
CTCGACCTGC GCATCATCTC CGCCACGCAC GTGGACCTGG TGGCGGCACA GAGCGACGGC
CGGTTCCGCT CCGATCTGTT CCACCGGCTC TGCGTGCTGA CCCTGACCAT TCCGCCGCTG
CGCGAGCGTG GCGAGGACAT CCTGCTGCTC GCGAATACGG TGCTGGCCGA ACACGGCCAC
GAGGCGCACC GGCGTATCCG TGGCTTCTCC ACCTGCGCGA CGCAGGCCAT GATGCAGTAC
ATGTGGCCCG GAAATGTGCG CGAACTGATC AACCGCGTGC GTCGCGCCAT CGTGATGACC
GACAACCGGA AAATCACGGC GGAGGATCTG CAACTGCACG GTGGGGTGGA GGTGCCACGC
AAGACGCTGG ATGCGATTCG CGAGGAGGCG GAACGCGAGG CGATCCGCTC CGTCATGGCC
AGCCATGGTT TTCACGTGGT GCCGGCGGCG CGCGAGCTCA ACGTGTCGCG CGTGACGCTA
TACCGGTTGA TGCACAAGCA CAACATCCGC ATCGACACGC AGCCCGGCGC GTCGGCGGAG
TAG
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| Protein sequence | MIPTLRAAPT AQPADPERAM RLAATPAGLG SATNKKFNVR ENVMDRLCKA PTRTAQIVLV
SRYEDFGFNA NQFGSGWEIR RVQQVRDLER LVRASSPMAG VLDLQTPYTD AELSQLEQAL
QHLHVMWVAI TSTAMLEDER IRRLIRDYCV DYVRTPFSFD ELLYTLKHAH GMACLHGARS
PELVARGPMI GECAPMGNMF RSLAKVAHND APVFISGESG TGKELAAQAI HEASSRRKGP
FVAINCGAIP SHLVQSELFG YEKGAFTGAN QRKIGWIEQA QGGTLFLDEI GDLPLESQVA
LLRFLQQGMI TRLGGHQSIP LDLRIISATH VDLVAAQSDG RFRSDLFHRL CVLTLTIPPL
RERGEDILLL ANTVLAEHGH EAHRRIRGFS TCATQAMMQY MWPGNVRELI NRVRRAIVMT
DNRKITAEDL QLHGGVEVPR KTLDAIREEA EREAIRSVMA SHGFHVVPAA RELNVSRVTL
YRLMHKHNIR IDTQPGASAE
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