| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5808 |
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| Symbol | prfC |
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| ID | 4042672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2570644 |
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| End bp | 2572236 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981227 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_587936 |
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| Protein GI | 94314727 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCGC TCGTTTCCGA AATTGCGCGT CGGCGCACAT TTGCCATCAT CTCCCACCCG
GACGCGGGTA AGACCACACT GACCGAGAAG CTGCTCTGGT TCGGCGGCGC AATTCAGGTG
GCCGGCGAGG TGCGCGCGCG CAAGGCCGAT CGCCATGCCA CCTCGGACTG GATGGAGCTG
GAGAAGCAGC GCGGCATCTC GGTGACGTCG TCGGTGATGC AGTTCCCGTA TCAGGCGCGT
CCGGAGTTGC CCGAGAACAT CGTGAACCTG CTCGACACGC CGGGCCACGA GGACTTCTCC
GAAGACACCT ACCGCACGCT GACCGCCGTG GATTCGGCCG TGATGGTGAT CGACTCGGTC
AACGGCGTGG AAGCGCAGAC GATCAAGTTG CTCAACGTCT GCCGTTTGCG CGCCACGCCG
ATCCTCACGT TCATCAACAA GCTGGACCGA GAAGGCCGCT CGCCGATCGA ACTGCTCGAT
GAAATCGAGG ACGTGCTCCA GATTCAGTGC GCGCCGATGA CCTGGCCGAT CGGCATGGGC
AAGGCGTTCC GTGGCGTGTA TCACCTGATC GACGACAAGG TGCAGCTGTT CGACCCCAAG
GGCGAGAAGG GCACGGCGGC GATCATCGAC GGCATCGACA ACCCGGAACT CGACCGTCTC
CTGGGCTCGC AGGCCGAGGA GCTCCGCATC GAGGTGGAAC TGGTGCGCGG CGCGTCGCAC
ACGTTCGACA AGGAAGCGTT CCTGGCCGGC AAGCAGTCGC CGGTCTACTT CGGCTCGGCC
ATCAACAACT TCGGTGTGCA GTCGCTGCTC GACGCGCTGT GCGAGCTGTC GCCCCCGCCG
CTGGCGCGCC AGACCGAAAG CCGCACCGTG GAGCCCGAGG AGGCCAAGTT CACCGGCTTC
GTATTCAAGA TCCAGGCGAA CATGGACCCG CGTCACCGCG ACCGCATTGC GTTCGTGCGC
GTCTGCTCGG GCCGCTTCGA TCGCGGCATG AAGCTGCTGC ACGTGTCGCA GGGCAAGACT
GTCGCGATCA ACAACGCCAT CACCTTCATG GCGCAGGACC GTAACACGAC TGAGGAAGCC
TTCGCGGGCG ACATCATCGG CGTGCCGAAC CACGGCACGA TCCGTCTCGG CGACGTGTTC
ACGGAAGGCG AGCCGCTGCG CTTCACGGGC ATCCCGTCGT TCGCGCCCGA GTTCTTCCGC
CGCGCGCGAC TGAACAACCC GCTCAAGGTC AAGCAGCTGC AGAAGGGTTT GCAGCAGCTT
GCCGAAGAAG GCGCGACGCA GATGTTCCGT CCGCTGGCTT CGAACGATCT GGTGTTGGGC
GCGGTCGGCA TGCTGCAGTT CGATGTGGTG GCGCACCGCC TGGAGCACGA GTACGGTGTG
GACGCGATCT TTGAATCGCA CGAATGCGCC ACGGCCCGCT GGCTGAAGGG CGATCCGGCC
GAAATCGAGA AGCTGATCGA CAAGGCCGGG CACAACGTGG CGCTCGATGG TGCGGGCGAC
CATGTCTACC TGGCCCCAAG CATGGTCAAC CTGCGTCTGA CGCAGGAGCG CTTCCCGAAT
ATCCGGTTCC TGGAAACGCG CGAGATCGTC TGA
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| Protein sequence | MSSLVSEIAR RRTFAIISHP DAGKTTLTEK LLWFGGAIQV AGEVRARKAD RHATSDWMEL
EKQRGISVTS SVMQFPYQAR PELPENIVNL LDTPGHEDFS EDTYRTLTAV DSAVMVIDSV
NGVEAQTIKL LNVCRLRATP ILTFINKLDR EGRSPIELLD EIEDVLQIQC APMTWPIGMG
KAFRGVYHLI DDKVQLFDPK GEKGTAAIID GIDNPELDRL LGSQAEELRI EVELVRGASH
TFDKEAFLAG KQSPVYFGSA INNFGVQSLL DALCELSPPP LARQTESRTV EPEEAKFTGF
VFKIQANMDP RHRDRIAFVR VCSGRFDRGM KLLHVSQGKT VAINNAITFM AQDRNTTEEA
FAGDIIGVPN HGTIRLGDVF TEGEPLRFTG IPSFAPEFFR RARLNNPLKV KQLQKGLQQL
AEEGATQMFR PLASNDLVLG AVGMLQFDVV AHRLEHEYGV DAIFESHECA TARWLKGDPA
EIEKLIDKAG HNVALDGAGD HVYLAPSMVN LRLTQERFPN IRFLETREIV
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