Gene Rmet_5806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5806 
SymbolfecA1 
ID4042670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2565959 
End bp2568154 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content63% 
IMG OID637981225 
Productferric citrate outer membrane transporter 
Protein accessionYP_587934 
Protein GI94314725 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4772] Outer membrane receptor for Fe3+-dicitrate 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACC GGGCACATGT CAATGCTTCC CGGATATCCA TTGTGCTGCC AGCATTCCGC 
CTTGCCTTCT GCGCGACCAG CGTCGCGCTT CTCACCCTCC CCCTCTCCTC CCAATCCCAA
ACCCCACCAG CCGCGAGCGC GGGCAACGAA GCCACGCTCA AGACCGTGAC CGTGGTGGGC
AACTGGCTTG AGGCCCCAAA TGAGGAAAAG GTCCTCGAGC ACCCCGGCGC CCGGACCATC
ATCGCCCGGG AAGCCATCGC CGAGACAGGG GCCAACAATG TGCGCGATGT GCTGCGCCAG
GTGCCTGGTG TCCAGGTACG GGACAACAAC GGCACAGGCG GCAGCGATAT CTCGCTGAAC
GTGGGCGTGC GCGGGTTGAC CTCGCGGCTC TCCCCCCGTT CGACGATCCT GATGGATGGC
GTGCCGGTGG CCGTGGCGCC CTACGGGCAG CCGCAACTGT CCATGGCGCC GCTGTCCCTG
GGCAATCTGG AAGCGGTGGA CGTGGTCCGT GGCGCGGGTT CGGTGCGATA CGGTCCGCAG
AACGTCGGCG GCATCATCAG CTTCGTGACA CGGGCGATCC CCAAGACCTT CGCGGCCGAC
GCGTCTGTCT CCACCGACAT CTACAGCTAC GGCAGCAGCA TCAAGGCCAA CCCCACCGCC
TTCATCGGCG GCACCAATGA CAATGGCCTC GGTGGCGCCC TGCTCTACTC GGGCGTGCAC
GGCAGCGGCT ATCGCGAGAA CAATGACAAC GTTGATATCG ATGACCTGAT GCTCAAGGGC
GCCTACCGGA TCTCCAAGAC CGACGAACTC TCGGCTGCGT TCCACTACTA CGACGCACAC
GCCGGTATGC CGGGCGGCCT GACACCGCAG CAGTTCGCGG ACGATCCCTT CCAGTCCACA
CGTCCGTACG ACAGTTTCTC GGGCCGGCGC TCTGATTACT CCTTCAAGTA CGCGCACAAC
GACAACAACC GCAATTTCGA AGTGCTGATG TACTACACCA GCAGCTTCCG CGGGAGCGCG
CTGGAGCAAC CGCGCAGAAA CACCACGCCA CAGCGTCTCC GCCTGACCAC CTCGCCACGG
AACTACCATG TGTTCGCCAT CGAGCCGCGC TACTCGCAAT TGTTCCGCAC CGGGAGCATC
AGCAACGAGA TAAGCGTCGG CTACCGTTAC CTGCGCGAGG GCAGCGAGGA AAAAGCCACG
CGTACCGCCT TTTACGCCCC GGGCAGCGTC TATGCGCCCG ATTTGCCGGC ACCCGTGTAT
CAGTGGCGCA CGGGCGGCAC TACGGCCAAT GCGTTCTACG TCGACGATAC GATCAATGTC
GGCAACTGGA CCATCACGCC GGGTCTGCGC TACGAATTCA TCCGCACGAA CCTGACTGAC
CACTTCACTG GCGTCAGGCG GGACGTATCG GCCGACGAAC CGCTGCCATC GTTGTCCATG
CTCTACCACC TCAGCGACAA ATGGACGGCA TTTGCCAACG CAGGCGTATC GTTCGGTCCG
CTGCAGTACT TCCAGATCGC GTCGACCACG AACGGTCTGA AGCCCGAGAA GGCGAAGACC
TATGAAATTG GCACGCACTT CGATGGCGTC AACGGCTGGG GCGGGGAGCT AACGCTATTC
AATATCGACT TCGATGACGA ACTGCAGCTT CAGGGAGGCC GCGGCGGCGC GCTCGATGCG
TGGACGAACC TCGGCGCCAC CACCCATCGC GGTGTCGAAT CGGGCCTGCG CTTCGACTTC
GGCTCGCTGA CGAATACGCT GGCCGGCCTG ACCGCCTATG CCACCTACAC GTTCACGGAC
GCCACCTACC AGCAAGGCGC ATTCGCTGGA CGCGATCTCC CCTTCTATTC GCGCCATGTG
GCCACGCTGG GAATGCGATA TGTGCGCAAC CGCTGGGCTT TCAATGTGGA CGGCTTCGCG
CAGTCGAAAC AACGCTCGCC AGGCAATCCG GCGCAATCGA CTGTGTATCA AACCCAGGAA
TCGTCAGACG GCGCACTCGG CGACATCCCC GGCTATGCGC TGATGAACGT GCGCGTGGGA
TACGACTTCG GCAAGACCGC GCAGAACCTG AAGCTGGTGC TCGGCATCAA GAACGTCTTC
GATCGCCGCT ATTACACGCG CTCCAACGAC AACAACCTGG GTATGTACGT GGGTATGCCC
CGCACGGTCT ATTTGCAGGC GTCGCTGGCG TACTGA
 
Protein sequence
MSHRAHVNAS RISIVLPAFR LAFCATSVAL LTLPLSSQSQ TPPAASAGNE ATLKTVTVVG 
NWLEAPNEEK VLEHPGARTI IAREAIAETG ANNVRDVLRQ VPGVQVRDNN GTGGSDISLN
VGVRGLTSRL SPRSTILMDG VPVAVAPYGQ PQLSMAPLSL GNLEAVDVVR GAGSVRYGPQ
NVGGIISFVT RAIPKTFAAD ASVSTDIYSY GSSIKANPTA FIGGTNDNGL GGALLYSGVH
GSGYRENNDN VDIDDLMLKG AYRISKTDEL SAAFHYYDAH AGMPGGLTPQ QFADDPFQST
RPYDSFSGRR SDYSFKYAHN DNNRNFEVLM YYTSSFRGSA LEQPRRNTTP QRLRLTTSPR
NYHVFAIEPR YSQLFRTGSI SNEISVGYRY LREGSEEKAT RTAFYAPGSV YAPDLPAPVY
QWRTGGTTAN AFYVDDTINV GNWTITPGLR YEFIRTNLTD HFTGVRRDVS ADEPLPSLSM
LYHLSDKWTA FANAGVSFGP LQYFQIASTT NGLKPEKAKT YEIGTHFDGV NGWGGELTLF
NIDFDDELQL QGGRGGALDA WTNLGATTHR GVESGLRFDF GSLTNTLAGL TAYATYTFTD
ATYQQGAFAG RDLPFYSRHV ATLGMRYVRN RWAFNVDGFA QSKQRSPGNP AQSTVYQTQE
SSDGALGDIP GYALMNVRVG YDFGKTAQNL KLVLGIKNVF DRRYYTRSND NNLGMYVGMP
RTVYLQASLA Y