| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5802 |
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| Symbol | edd1 |
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| ID | 4042666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2560235 |
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| End bp | 2562337 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981221 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_587930 |
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| Protein GI | 94314721 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase
[TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.72626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.446982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCCGC CGCGCGGCGC ATTGGTTCCG GCCATGGTAC GTCACTCGCC GCCGCTTGGG
CAGGGGGAAG TGGCCACGAG CATGACCCGC GCCGCACATC GGACCCAAAG CGTACCCGTT
TCTGCGTGGC CCGGGTCACC GTGGCGGAAC ATCCGTGAGC CGCGTCAATC CCACATGCAG
ACGCCCCATG CAGACGGACA TGTCGTCGAT CGGGACGGCA TTCCGATGAT GCCCAGGAAT
TTCGACTACG CTGATAGCGC CCTACAGGAG ACTTCCATGC CCCGCCACCC CGTACTGGAT
GCGGTCACGG CCCGCATCGT GGCCCGCAGT GCCCCTACCC GCCAGGCCTA CCTGCAACGC
ACCCGCGCCA TGGCGGGCCA GAAGGTCGAA CGCGCCAACC TGTCGTGCAC CAATCTCGCA
CACGGTGTGG CGGCGATGCC CGATGACGCG AAGATCCGGC TCAAGGCGCA GGAGCGGCCG
AATCTCGCGA TCGTGTCGGC CTACAACGAG ATGCTGTCCG CACACCAGCC GCTGAACGCC
TTTCCGCAGT GGATCAAGGA AGCCGCGCTG GAAGCCGGCG GTACCGCGCA GTTCGCCGGT
GGCACGCCGG CCATGTGCGA TGGGGTCACG CAGGGCCAGG ACGGCATGGA CCTGTCGCTG
TTCTCGCGTG ACGTGATCGC GATGGCCACC GCGGTCGCGC TATCGCACCA GATGTTCGAC
GGCGTGCTCT GCCTCGGCGT GTGCGACAAG ATCGTGCCAG GCCTGGTGAT GGGCGCGCTG
TCGTTCGGAC ACCTGCCCGC CGTGTTCGTG CCGGGTGGCC CGATGACGAC CGGCATGGGC
AACGAGGAAA AGGCGCACAT CCGCCAGCTC TACGCGGAAG GCAAGATCGG GCGCGAGGAA
CTGCTGGAAG CCGAGACACG GTCGTACCAC GGCCCGGGCA CCTGCACGTT CTACGGCACC
GCCAATTCGA ACCAGATGCT CATGGAGATC ATGGGCCTCC ATCTGCCGGG CACGGCCTTC
ATCAATCCGA ACACGCCGCT CCGCGAGGCC CTGACCCGCG AATCCGCGCG CCAGGCGCTG
CGGCTCGTCC ACGGCGGCAC GCGCTACATG CCGATTGCCG AAGTCCTGGA CGAACGCGCC
TTTGTTAACG GTATCGTCGG GTTGCTGGCC ACTGGTGGGT CCACCAACCA CACGTTGCAC
CTGATCGCCA TGGCCCGCGT GGCCGGCATT CTCCTGACCT GGGACGATTT CGACGAACTG
TCCGCCGCCG TGCCCTTGCT GGCGCGCGTG TACCCGAACG GCAAGGCCGA CGTGAACCAG
TTCCAGGCGG CCGGCGGGCT GCCGGTGGTG ATACGTGGGC TGCTGTCGCT GGGACTGCTG
CATGACGACG TCAATACGAT CGCCGGCACC GGTCTGGCCG ATTACACGCG CGAGCCGGTG
CTGCGAGACG GCAAGCTGAG CTGGATCGAC GGCCCGGTGA AGTCCCTGGA CGACACCATC
GTGCGCACCG CCGACAGCCC GTTCGCCCCC GACGGCGGTA TCAAGCTGCT CGATGGCAAG
CTCGGCCGCT GCGTCATCAA GACATCGGCC GTCAAACCCG AGCATCAGGT CGTGGAAGCA
CCCGCCATCG TGTTCCATCG CCAGGACGAT CTGCTGGCTG CCTTCAAGCG TGGCGAGCTG
GAGCGTGATT TCGTGGCCGT GCTCCCGTGG CAAGGCCCGT CCGCGTGCGG GATGCCCGAG
CTGCACAAGC TCACGCCGAC GCTGACGTTG CTGCAGGATC GCGGCTTCCA CGTGGCGCTG
GTGACGGATG GCCGCATGTC GGGCGCATCG GGCAAAGTAC CGGCTGCCAT CCACGTCTGC
CCCGAAGCGC ATTCGGGCGG AGAGATCGGC AAGGTCCGCA CGGGCGATAT CGTGCGCGTG
GATGCCCCGG CAGGCGTGCT CACGGTCAGG GTCGACGAGG CGGAATGGGC GTCCCGGCCC
ATGGACACGC CCGATCTGAC ACGCAATCGG CATGGCGTGG GCCGCGACCT CTTCGGCGGC
TTTCGCGCGC ACGTGAGCAC AGCCGAAGCC GGCGCGTGTT CGCTGTTCGC GGAAGAGCAT
TAA
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| Protein sequence | MSPPRGALVP AMVRHSPPLG QGEVATSMTR AAHRTQSVPV SAWPGSPWRN IREPRQSHMQ
TPHADGHVVD RDGIPMMPRN FDYADSALQE TSMPRHPVLD AVTARIVARS APTRQAYLQR
TRAMAGQKVE RANLSCTNLA HGVAAMPDDA KIRLKAQERP NLAIVSAYNE MLSAHQPLNA
FPQWIKEAAL EAGGTAQFAG GTPAMCDGVT QGQDGMDLSL FSRDVIAMAT AVALSHQMFD
GVLCLGVCDK IVPGLVMGAL SFGHLPAVFV PGGPMTTGMG NEEKAHIRQL YAEGKIGREE
LLEAETRSYH GPGTCTFYGT ANSNQMLMEI MGLHLPGTAF INPNTPLREA LTRESARQAL
RLVHGGTRYM PIAEVLDERA FVNGIVGLLA TGGSTNHTLH LIAMARVAGI LLTWDDFDEL
SAAVPLLARV YPNGKADVNQ FQAAGGLPVV IRGLLSLGLL HDDVNTIAGT GLADYTREPV
LRDGKLSWID GPVKSLDDTI VRTADSPFAP DGGIKLLDGK LGRCVIKTSA VKPEHQVVEA
PAIVFHRQDD LLAAFKRGEL ERDFVAVLPW QGPSACGMPE LHKLTPTLTL LQDRGFHVAL
VTDGRMSGAS GKVPAAIHVC PEAHSGGEIG KVRTGDIVRV DAPAGVLTVR VDEAEWASRP
MDTPDLTRNR HGVGRDLFGG FRAHVSTAEA GACSLFAEEH
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