| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5796 |
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| Symbol | |
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| ID | 4042660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2553878 |
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| End bp | 2554885 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981215 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_587924 |
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| Protein GI | 94314715 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.148591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC GGCCGCTGAA GCCGACATCC AGAAGCAGTC TCTCCCTCGC CTTGCCGTTA
CGTCCTGAAG TCATGAAGCC CGCTCTGCTC ATCCTCAACC ATCTCGAACC TGCCCACCTC
GCCCTTATCG CCGAACACTA CGACGTTCGC TATGCGCCGA CTGCCGCCGA ACGCGCTACC
GAGGTCGCTA CCAATGGCAA GACCTTCCGC GCGGTGCTCA CCATCGGCAG CATTGGCTTG
ACCGCGAAAG AAATCGACGC CATGCCCGCG CTGGAGCTGG TCTGCGCGAT GGGTGCCGGC
TACGAGAACA TTGACACCGC CAAATGCCGC GAACGCGGCA TTGCCGTCGG CAACGGCGCC
GGCACCAATG ACAGTTGCGT GGCAGACCAT GCGATGGCGT TGCTGCTGGC GTCGGTACGC
CGCGTACCCG CGTACGATCG CGCCACGCGC GAAGGCATCT GGCGCAATGC GCTGCCGCTG
GCCCCGAATT TGTCGGGCAA GCGGATGGGC ATCGTCGGGC TGGGCACGAT CGGCCGGCGA
ATCGCGCAAC GTGGTCTCGG GTTCGATCTG GAAATCGGCT ATCACAACCG CCGCCCGCGC
ACGGACGTGC CGCATCGCTA CTTCGACAGC GTGATGTCCC TGGCCGAATG GGCCGACTAC
CTGATCATCG CCACGCCGGG CGGCGCAGAG ACGCGCCATA TGGTCGACAC GCCCGTGCTG
CGCGCGCTGG GCCCGGCGGG CTATCTGGTG AATATCGCGC GTGGCAGCGT GGTAGACACG
GCGGCGCTGG CGGCCGCGCT TCGGGCAGGC GAACTAGGCG GCGCGGGGCT CGATGTCTAC
GAAAGCGAGC CGGCACCGCC CGTCGAACTG TTCGATTGCC CCAACGTCGT GCTGACGCCG
CACGTGGCCG GCTGGTCGCC CGAAGCAATC TTCGCCTCGG TCAGCCAGTT CGTCGAGAAC
GCGCGGCGGC ACTTTGCCGG CGAGCCGCTG GTGGCGCCGG TACTCTGA
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| Protein sequence | MALRPLKPTS RSSLSLALPL RPEVMKPALL ILNHLEPAHL ALIAEHYDVR YAPTAAERAT
EVATNGKTFR AVLTIGSIGL TAKEIDAMPA LELVCAMGAG YENIDTAKCR ERGIAVGNGA
GTNDSCVADH AMALLLASVR RVPAYDRATR EGIWRNALPL APNLSGKRMG IVGLGTIGRR
IAQRGLGFDL EIGYHNRRPR TDVPHRYFDS VMSLAEWADY LIIATPGGAE TRHMVDTPVL
RALGPAGYLV NIARGSVVDT AALAAALRAG ELGGAGLDVY ESEPAPPVEL FDCPNVVLTP
HVAGWSPEAI FASVSQFVEN ARRHFAGEPL VAPVL
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